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Beschreibung

This book offers a comprehensive, unique and up-to-date exploration of diatom ecology spanning from fundamental molecular aspects to the intricate dynamics of metacommunities.

In recent years there has been a considerable increase in the amount of research devoted to diatom ecology, with a wide spectrum of approaches. This large amount of information, published in many different journals and books, makes it very difficult to keep up to date, both for the trained researcher and for students. Eduardo A. Morales (d. May 2023) had the original idea to assemble chapters on various subjects within diatom ecology. The questions he posed to potential contributors framed the current book consisting of 12 chapters.

  • Are diatoms suitable tools for ecological restoration?
  • What would be the features that make them reliable in this context?
  • What makes diatoms ecologically successful?
  • In an ecological sense, why is there such variability in diatom reproductive strategies and why are they worth considering?
  • What do new approaches in ecological synthesis provide to diatom ecology, biogeography and metacommunities?
  • Are all diatoms widely spread and each species uniquely characterized by its own, unaltered phenotype?
  • Can we really make any ecological consideration without knowing (with a high degree of certainty) the identity of taxa?
  • Are urban ecosystems important repositories of biodiversity?
  • What are the benefits and the progress in diatom ecology made by the diatom guild perspective?
  • Why, how and when are soil diatoms used in bioindication and what are the benefits of such an approach?
  • Are diatoms bona fide indicators of climate change?
  • Are diatom communities in temporary rivers important for these lotic ecosystems as they are subjected to the effects of climate change?
  • Do diatoms in peatlands behave differently from their terrestrial and aquatic (rivers, lakes, others) counterparts?

Audience
The book is intended primarily for professionals in the fields of diatom research, algal research (phycology), organismal, population and community ecology, limnology, microbiology, organismal biology, paleoecology and paleolimnology. The book will also serve as a reference for graduate students seeking guidance on terminology, techniques, and current methods in diatom research.

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Veröffentlichungsjahr: 2024

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Table of Contents

Cover

Table of Contents

Series Page

Title Page

Copyright Page

Dedication Page

Preface

1 Using Diatoms to Guide Successful Ecological Restoration

1.1 Introduction

1.2 Components of Successful Ecosystem Restoration

1.3 Incorporating Diatoms in Ecological Restoration

1.4 Communicating Diatom-Based Indicators of Restoration Progress

1.5 Summary and Opportunities

Acknowledgments

References

2 Abundance-Occupancy Relationships in Freshwaters: The Case of Pond Diatoms

2.1 Introduction

2.2 Materials and Methods

2.3 Results

2.4 Discussion

Acknowledgments

References

3 The Ecology of Diatom Reproduction

3.1 Introduction

3.2 Reports of Auxosporulation in Natural Populations

3.3 Ecological Significance of Auxosporulation

3.4 Future Prospects for Phenological Studies

Acknowledgments

References

4 Deterministic and Stochastic Effects on Freshwater Diatom Biodiversity and Community Composition

4.1 Introduction

4.2 Deterministic Effects on Diatom Metacommunities

4.3 Stochastic Effects on Diatom Metacommunities

4.4 Relative Importance of Deterministic and Stochastic Effects on Diatom Metacommunities

4.5 Assembly Processes Over Time

4.6 Assembly Processes Over Space

4.7 Concluding Remarks and Future Directions

References

5 Recent Insights into Diatom Distributions and the Contributions of Molecular Approaches

5.1 Introduction

5.2 A Metacommunity Framework

5.3 Metabarcoding

5.4 The Problem of Undersampling

5.5 Conclusions

Acknowledgment

References

6 Diatom Taxonomy: Disentangled from Ecology?

6.1 Introduction

6.2 Diatom Taxonomy

6.3 Diatom Ecology

6.4 Where Are the Challenges?

6.5 Integrating Information

6.6 Conclusions

Acknowledgments

References

7 Diatom Biodiversity in Urban Freshwater Ecosystems: Opportunities and Challenges for Conservation

7.1 Contextualizing Urban and Novel Ecosystems

7.2 Diatom Diversity in Novel Freshwater Ecosystems: Insights and Future Directions from a Systematic Literature Review

7.3 Mapping Gaps and Opportunities

7.4 Ecological Importance of Diatoms in Monitoring and Managing Urban Freshwater Ecosystems

7.5 Climate Change and Conservation of Diatom Biodiversity in Urban Systems

7.6 New Approaches and Perspectives for the Future

References

8 Guilds for Diatoms: History and Future Prospects

8.1 The Origin and History of the Guild Concept

8.2 Passy’s Idea: Use of the Guild Concept in Diatom Research

8.3 Relationship Between Guilds and Environmental Variables

8.4 Effect of Global Threatening Processes on Guilds

8.5 Diatom Guilds in Plankton and Their Ecological Role

8.6 Guild Dispersal, Guild-Based Metacommunity Analysis and Β-Diversity

8.7 Guilds in Conservation Biology Studies

8.8 Guilds in the Past, Present and Future

8.9 Conclusion and Future Directions of the Guild Concept in Diatom Community Ecology

Acknowledgment

References

9 Soil Diatoms and Their Use in Bioindication

9.1 Introduction

9.2 Taxonomy

9.3 Ecology

9.4 Diatoms as Environmental Markers

9.5 Soil Diatoms in Forensic Sciences

9.6 Future Perspectives

Appendix

References

10 Lacustrine Diatoms as Paleoclimate Proxies and Their Use in Climate Change Research

10.1 Introduction

10.2 Lacustrine Diatoms as Archives of Climatic Signals

10.3 Diatoms, Limnology and Climate

10.4 Conclusions

Acknowledgments

References

11 Diatoms in Temporary Rivers: Importance in a Global Climate Change Context

11.1 Introduction

11.2 Diatoms Adaptation Mechanisms in Temporary Rivers

11.3 Flow Reduction/Lentification

11.4 Desiccation Stress

11.5 Thermal Stress

11.6 UV Radiation Exposure

11.7 Community Dynamics in Temporary Rivers

11.8 Diatoms as Bioindicators in Temporary Rivers

11.9 Final Remarks

References

12 The Ecology of Diatoms in Peatlands: Communities from Tierra del Fuego Peat Bogs as a Study Case

12.1 Introduction

12.2 Singularity of Peatland Diatoms

12.3 Diatoms in Tierra del Fuego Peat Bogs

12.4 Closing Remarks and Future Perspectives

References

Index

Also of Interest

End User License Agreement

List of Tables

Chapter 1

Table 1.1 Twelve criteria used to evaluate indicators of ecosystem restoration...

Chapter 2

Table 2.1 Main limnological variables measured in the study sites.

Table 2.2 GLM ANCOVA results testing the contribution of different predictors ...

Chapter 3

Table 3.1 The 32 records of auxosporulation in natural material given by Smith...

Chapter 4

Table 4.1 A glossary of the main concepts discussed in this chapter with suppo...

Chapter 5

Table 5.1 Summary of recent molecular-based studies on factors affecting distr...

Chapter 8

Table 8.1 Assignment of taxa to diatom guilds according to Passy [8.45], Rimet...

Table 8.2 The effects of environmental variables on guilds’ abundance.

Chapter 9

Table 9.1 Articles used for data analysis in Figure 9.1. The first author(s), ...

Chapter 11

Table 11.1 Diatoms adaptation mechanisms (in lines) to the main stressors (in ...

Chapter 12

Table 12.1 Mean and standard deviation of main chemical parameters.

List of Illustrations

Chapter 1

Figure 1.1 A conceptual framework developed for the Comprehensive Everglades R...

Figure 1.2 Graphical depiction of the spatial and temporal scales represented ...

Figure 1.3 A conceptual ecological model used to guide the restoration of the ...

Figure 1.4 Modification of diagram developed to guide the European Water Frame...

Figure 1.5 (a) Map of the Florida Everglades in the southeast U.S.A (inset) sh...

Figure 1.6 Illustration from Stevenson and Smol [1.27] showing a nonlinear rel...

Figure 1.7 Threshold Indicator Taxa Analysis (TITAN) of benthic diatom respons...

Figure 1.8 Percent oligotrophic diatoms present in benthic algal assemblages u...

Figure 1.9 Artist depictions of Everglades diatoms, including (a) ceramic scul...

Chapter 2

Figure 2.1 Study area showing the location of the 22 studied ponds in the Duer...

Figure 2.2 Best-fit curves describing AOR patterns for planktonic (black) and ...

Figure 2.3 Best-fit curves describing AOR patterns for nonmotile (black) and m...

Figure 2.4 Abundance-occupancy relationship in pond diatoms. Dot colors repres...

Figure 2.5 Abundance-occupancy relationship in pond diatoms. Circle diameter i...

Chapter 3

Figure 3.1 Many types of auxosporulation can be found in natural samples. (a)

Figure 3.2 (a)

Cymbella affinis

undergoing synchronous Type I sexual reproduct...

Figure 3.3 Auxosporulation recorded in epipelon from Blackford Pond, Edinburgh...

Figure 3.4 Frequencies of records of auxosporulation in nature (495 in total),...

Figure 3.5 Auxosporulation on microscope slides placed vertically, spanning th...

Chapter 7

Figure 7.1 Conceptual figure showing urban water bodies as novel ecosystems [7...

Figure 7.2 Graph showing trends in the number of published papers on novel and...

Figure 7.3 Distribution of studies retrieved from our search using the Scopus ...

Figure 7.4 Scientometric VosViewer map created based on the 415 papers found o...

Chapter 8

Figure 8.1 An overview of the history and development of the guild concept wit...

Figure 8.2 Schematic structure of the biofilm built by diatom ecological guild...

Figure 8.3 Overview of guilds in diatom ecological studies—from local to globa...

Chapter 9

Figure 9.1 (a) Number of publications on terrestrial diatoms between 1945 and ...

Figure 9.2 Light microscopy images of some common soil diatoms. 1,

Mayamaea ex

...

Figure 9.3 Light microscopy images of

Pinnularia

section Distantes, a clade of...

Figure 9.4 Comparison between diatom preparation techniques. Direct microscope...

Figure 9.5 Figure explaining the concept of terrestrial diatoms as hydrologica...

Chapter 10

Figure 10.1 Diagram showing the potential effects of climatic forcings (a) and...

Figure 10.2 Paleoenvironmental analysis of a sediment core covering the period...

Figure 10.3 Paleoenvironmental reconstruction of a sedimentary sequence of the...

Figure 10.4 Selected parameters and paleoenvironmental inferences in a core co...

Chapter 11

Figure 11.1 Example of dry and ponded habitats present in temporary rivers. La...

Figure 11.2 Temporal dynamics of a temporary river with the presence of wet an...

Figure 11.3 Total number of publications on temporary rivers (light grey) and ...

Figure 11.4 Aquatic States (AS), depending on the hydrological conditions (bas...

Chapter 12

Figure 12.1 Location of the study area and spatial distribution of the sampled...

Figure 12.2 Venn diagrams representing a general comparison of the diatom flor...

Figure 12.3 Distance-based redundancy analyses (dbRDA) based on Jaccard distan...

Guide

Cover Page

Table of Contents

Series Page

Title Page

Copyright Page

Dedication Page

Preface

Begin Reading

Index

Also of Interest

WILEY END USER LICENSE AGREEMENT

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Scrivener Publishing100 Cummings Center, Suite 541JBeverly, MA 01915-6106

Diatoms: Biology and Applications

Series Editors: Richard Gordon and Joseph Seckbach

There are about 100,000 species and as many papers written about them since their discovery over three hundred years ago. The literature on diatoms shows about 60,000 papers during the period 2006-2023. In this context, it is timely to review the progress to date, highlight cutting-edge discoveries, and discuss exciting future perspectives. To fulfill this objective, this Diatom Series has been launched under the leadership of two experts in diatoms and related disciplines. The aim is to provide a comprehensive and reliable source of information on diatom biology and applications and enhance interdisciplinary collaborations required to advance knowledge and applications of diatoms.

Publishers at ScrivenerMartin Scrivener ([email protected])Phillip Carmical ([email protected])

Diatom Ecology

From Molecules to Metacommunities

Edited by

Nora I. Maidana

Universidad de Buenos Aires-CONICET, Argentina

Magdalena Licursi

Instituto Nacional de Limnología (CONICET-UNL), Argentina

and

Eduardo Morales†

This edition first published 2024 by John Wiley & Sons, Inc., 111 River Street, Hoboken, NJ 07030, USA and Scrivener Publishing LLC, 100 Cummings Center, Suite 541J, Beverly, MA 01915, USA© 2024 Scrivener Publishing LLCFor more information about Scrivener publications please visit www.scrivenerpublishing.com.

All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording, or otherwise, except as permitted by law. Advice on how to obtain permission to reuse material from this title is available at http://www.wiley.com/go/permissions.

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For details of our global editorial offices, customer services, and more information about Wiley products visit us at www.wiley.com.

Limit of Liability/Disclaimer of WarrantyWhile the publisher and authors have used their best efforts in preparing this work, they make no representations or warranties with respect to the accuracy or completeness of the contents of this work and specifically disclaim all warranties, including without limitation any implied warranties of merchant-ability or fitness for a particular purpose. No warranty may be created or extended by sales representatives, written sales materials, or promotional statements for this work. The fact that an organization, website, or product is referred to in this work as a citation and/or potential source of further information does not mean that the publisher and authors endorse the information or services the organization, website, or product may provide or recommendations it may make. This work is sold with the understanding that the publisher is not engaged in rendering professional services. The advice and strategies contained herein may not be suitable for your situation. You should consult with a specialist where appropriate. Neither the publisher nor authors shall be liable for any loss of profit or any other commercial damages, including but not limited to special, incidental, consequential, or other damages. Further, readers should be aware that websites listed in this work may have changed or disappeared between when this work was written and when it is read.

Library of Congress Cataloging-in-Publication Data

ISBN 978-1-394-17445-4

Cover image: The Manzores Stream is a tributary of the Uruguay River. Photograph by Dr. Martin D. Novoa, Universidad Nacional de Entre Rios, ArgentinaCover design by Russell Richardson

Dedicated to Eduardo A. Morales In Memoriam 1968-2023

Eduardo Antonio Morales Luizaga (November 20, 1968 – May 19, 2023) was a distinguished biologist and educator, born in Argentina and proudly holding Bolivian citizenship. His academic journey was characterized by an unwavering commitment to advancing the field of ecology and fostering knowledge both locally and internationally.

Eduardo’s educational achievements included a bachelor’s degree in Biology from the University Mayor de San Simón in 1993. Seeking global perspectives, he pursued higher education in the United States, earning a Master of Science in Ecology from the University of Connecticut in 1997 and a PhD in Ecology in 2000. Eduardo’s dedication to learning was further demonstrated by his Diplomat in Higher Education from the Universidad Católica Boliviana in 2008.

Throughout his career, Eduardo held various positions that showcased his expertise and passion for ecology. He served as a lecturer at the Universidad Católica Boliviana, Cochabamba, Bolivia, and took on the role of curator at the Cryptogamic Herbarium within the same institution. Additionally, he contributed significantly as an associate researcher at the Phycology Section of the Patrick Center for Environmental Research, Academy of Natural Sciences of Drexel University in Philadelphia, Pennsylvania, USA.

Eduardo’s commitment to international collaboration was evident in his participation in numerous graduate courses and workshops spanning several countries. Notable among these were workshops on taxonomy, limnology, freshwater phytoplankton, and the harmonization of algal taxonomy in the United States and Latin America.

With a wealth of experience, Eduardo held key roles in academia and research. He played a pivotal part in the National Water Quality Assessment Program, serving as the taxonomy coordinator and analyst. As a research scientist at the Diatom Laboratory in the Phycology Section, Patrick Center for Environmental Research, he led workshops and contributed significantly to projects on river and lake diatoms in the continental United States.

Eduardo’s dedication to education extended beyond borders. He served as an invited lecturer and associate researcher in Bolivia, impacting the scientific community and inspiring future generations. His roles as a lecturer in various biology and ecology courses at the Universidad Católica Boliviana highlighted his commitment to knowledge dissemination.

In recognition of his contributions, Eduardo was an active member of several professional societies, including the Northeast Algal Society, Bolivian Limnological Society, Bolivian Scientific Society, Latin American and Caribbean Phycological Society, and Peruvian Phycological Society.

Eduardo received numerous honors, awards, and distinctions, such as the Fulbright Scholarship, Francis Rice Trainor Scholarship Award, and multiple staff education and development grants from the Academy of Natural Sciences of Philadelphia. His legacy continues through ongoing grants and research projects, where he focused on assessing diatom diversity in Bolivian cloud forests and studying algal biodiversity in various regions of Bolivia.

His impact on the scientific community, his commitment to education, and his contributions to environmental research leave an enduring legacy that will inspire future generations in Bolivia and beyond.

Bibliography of Eduardo Morales

[1.1] Cadima, M. and Morales, E.A. (1992) Estudio preliminar cualitativo de la comunidad ficológica en tres zonas del río Rocha, Cochabamba, Bolivia [Preliminary qualitative study of the algal community in three zones of the Rocha River, Cochabamba, Bolivia].

Acta Limnol. Brasil.

4, 359-370.

[1.2] Cadima, M. and Morales, E.A. (1994) Estudio cualitativo del fitoplancton de 6 estanques de la Estación Pscícola Pirahiba-Valle del Sajta. Cochabamba, Bolivia [Qualitative study of the phytoplankton from 6 tanks in the Pirahiba-Valle del Sajta Fisheries, Cochabamba, Bolivia].

Pub. Fac. Cs. Tecnol. UMSS. Ser. Científ.

3(2), 4-16.

[1.3] Cadima, M., Morales, E.A. and Dalence, M. (1994) Aporte al estudio de la ficoflora de Tablas Monte. Cochabamba, Bolivia [Contribution to the study of the phycoflora from Tablas Monte, Cochabamba, Bolivia].

Pub.. Fac. Cs. Tecnol. UMSS. Ser. Científ.

3(2), 17-37.

[1.4] Morales, E.A. and Trainor, F.R. (1996) Phytoplankton community of Alalay Pond, Cochabamba, Bolivia.

Algae

11(2), 207.

[1.5] Morales, E.A. and Trainor, F.R. (1997) Algal phenotypic plasticity: Its importance in developing new concepts.

Algae

12, 147-157.

[1.6] Trainor, F.R. and Morales, E.A. (1997) Implications of microalgal phenotypic plasticity [abstract].

Phycologia

36(4), 112. WOS:000202958000428

[1.7] Morales, E.A. (2000)

Limnological studies in Connecticut lakes: The use of periphytic diatoms in the assessment of lake trophic status

. University of Connecticut, Storrs, Connecticut, USA.

[1.8] Morales, E.A. and Potapova, M. (2000)

Third NAWQA Diatom Taxonomy Harmonization Workshop. Patrick Center for Environmental Research [Report No. 00-8]

. The Academy of Natural Sciences of Philadelphia, Philadelphia, PA, USA.

[1.9] Morales, E.A. (2001) Morphological studies in selected fragilarioid diatoms (Bacillariophyceae) from Connecticut waters (USA).

Proceedings of the Academy of Natural Sciences of Philadelphia

151, 105-120. WOS:000173000500009

[1.10] Morales, E.A. (2001)

Fifth NAWQA Taxonomy Workshop on

Harmonization of Algal Taxonomy June 2001

.

[1.11] Morales, E.A., Siver, P.A. and Trainor, F.R. (2001) Identification of diatoms (Bacillariophyceae) during ecological assessments: Comparison between light microscopy and scanning electron microscopy techniques.

Proceedings of the Academy of Natural Sciences of Philadelphia

151, 95-103. WOS:000173000500008

[1.12] Clason, T., Acker, F., Morales, E. and Marr, L. (2002)

Analysis of Diatoms on Microscope Slides Prepared From USGS NAWQA Program Algae Samples. Protocols for the analysis of algal samples collected as part of the US Geological Survey National Water-Quality Assessment Program

. 61.

[1.13] Morales, E.A. (2002) Studies in selected fragilarioid diatoms of potential indicator value from Florida (USA) with notes on the genus

Opephora

Petit (Bacillariophyceae).

Limnologica

32(2), 102-113. WOS:000178729900002

[1.14] Morales, E.A. (2002)

Eighth NAWQA Taxonomy Workshop on

Harmonization of Algal Taxonomy October 25-27, 2002

.

[1.15] Morales, E.A. and Charles, D.F. (2002)

Tenth NAWQA Taxonomy Workshop on Harmonization of Algal Taxonomy

June 13-15, 2002.

[1.16] Morales, E.A. and Hamilton, P.B. (2002)

Seventh NAWQA Taxonomy

Workshop on Harmonization of Algal Taxonomy

, Philadelphia, PA, USA.

[1.17] Manoylov, K.M., Morales, E.A. and Stoermer, E.F. (2003)

Staurosira stevensonii

sp. nov. (Bacillariophyta), a new taxon from Florida, USA.

European Journal of Phycology

38(1), 65-71. WOS:000184702800007

[1.18] Morales, E.A. (2003)

Fragilaria pennsylvanica

, a new diatom (Bacillariophyceae) species from North America, with comments on the taxonomy of the genus

Synedra

Ehrenberg.

Proceedings of the Academy of Natural Sciences of Philadelphia

153, 155-166. WOS:000187500900011

[1.19] Morales, E.A. (2003) On the taxonomic status of the genera

Belonastrum

and

Synedrella

proposed by Round and Maidana (2001).

Cryptogamie Algologie

24(3), 277-288. WOS:000185932400007

[1.20] Morales, E.A. and Edlund, M.B. (2003) Studies in selected fragilarioid diatoms (Bacillariophyceae) from Lake Hovsgol, Mongolia.

Phycological Research

51(4), 225-239.

[1.21] Morales, E.A. (2005) Observations of the morphology of some known and new fragilariold diatoms (Bacillariophyceae) from rivers in the USA.

Phycological Research

53(2), 113-133. WOS:000231180800004

[1.22] Morales, E.A., Bahls, L.L. and Cody, W.R. (2005) Morphological studies of

Distrionella incognita

(Reichardt) Williams (Bacillariophyceae) from North America with comments on the taxonomy of

Distrionella

Williams.

Diatom Research

20(1), 115-135. WOS:000228697800004

[1.23] Morales, E.A. and Le, M. (2005) A new species of the diatom genus

Adlafia

(Bacillariophyceae) from the United States.

Proceedings of the Academy of Natural Sciences of Philadelphia

154, 149-154. WOS:000230829500011

[1.24] Morales, E.A. and Le, M. (2005) The taxonomy of the diatom

Lacunicula sardiniensis

Lange-Bertalot, Cavacini, Tagliaventi et Alfinito and its relationship with the genus

Craticula

Grunow (Bacillariophyceae).

Proceedings of the Academy of Natural Sciences of Philadelphia

154, 155-161. WOS:000230829500012

[1.25] Lowe, R.L., Morales, E. and Kilroy, C. (2006)

Frankophila biggsii

(Bacillariophyceae), a new diatom species from New Zealand.

New Zealand Journal of Botany

44(1), 41-46. WOS:000237690900004

[1.26] Morales, E.A. (2006) Small

Planothidium

Round et Bukhtiyarova (Bacillariophyceae) taxa related to

P. daui

(Foged) Lange Bertalot from the United States.

Diatom Research

21(2), 325-342. WOS:000241822400007

[1.27] Morales, E.A. and Manoylov, K.M. (2006) Morphological studies on selected taxa in the genus

Staurosirella

Williams et Round (Bacillariophyceae) from rivers in North America.

Diatom Research

21(2), 343-364. WOS:000241822400008

[1.28] Siver, P.A., Morales, E.A., Van de Vijver, B., Smits, M., Hamilton, P.B., Lange-Bertalot, H. and Hains, J.J. (2006) Observations on

Fragilaria longifusiformis

comb. nov. et nom. nov (Bacillariophyceae), a widespread planktic diatom documented from North America and Europe.

Phycological Research

54(3), 183-192. WOS:000240492400002

[1.29] Morales, E.A. and Vis, M.L. (2007) Epilithic diatoms (Bacillariophyceae) from cloud forest and alpine streams in Bolivia, South America.

Proceedings of the Academy of Natural Sciences of Philadelphia

156, 123-155. WOS:000261854400010

[1.30] Morales, E.A., Vis, M.L., Fernández, E. and Kociolek, J.P. (2007) Epilithic diatoms (Bacillariophyta) from cloud forest and alpine streams in Bolivia, South America II: A preliminary report on the diatoms from Sorata, Department of La Paz.

Acta Nova

3(4), 680-696.

[1.31] Ramirez-Herrera, M.A., Teresa, M., Cundy, A., Kostoglodov, V., Carranza-Edwards, A., Morales, E. and Metcalfe, S. (2007) Sedimentary record of late-Holocene relative sea-level change and tectonic deformation from the Guerrero Seismic Gap, Mexican Pacific Coast.

The Holocene

17(8), 1211-1220.

[1.32] Siver, P.A., Hamilton, P.B. and Morales, E.A. (2007) Notes on the genus

Nupela

(Bacillariophyceae) including the description of a new species,

Nupela scissura

sp. nov. and an expanded description of

Nupela paludigena

.

Phycological Research

55(2), 125-134. WOS:000245745600005

[1.33] Morales, E.A., Fernandez, E., Fernandez, C.E., Lizarro, D. and Alcoreza, P. (2008) Algal studies in Bolivia: A compilation and preliminary analysis of existing phycological literature.

Gayana Botanica

65(1), 93-108. WOS:000258598700009

[1.34] Siver, P.A., Hamilton, P.B. and Morales, E.A. (2008)

Brevilinea pocosinensis

Siver, Hamilton & Morales gen. et sp nov., a new diatom (Bacillariophyceae) genus from North Carolina, USA.

Phycological Research

56(3), 141-148. WOS:000258597800001

[1.35] Acs, É., Morales, E.A., Kiss, K.T., Bolla, B., Plenkovic-Moraj, A., Reskóné, M.N. and Ector, L. (2009)

Staurosira grigorszkyi

nom. nov. (Bacillariophyceae) an araphid diatom from Lake Balaton, Hungary, with notes on

Fragilaria hungarica

Pantocsek.

Nova Hedwigia

89(3-4), 469-483. WOS:000272160700013

[1.36] Morales, E.A., Fernández, E. and Kociolek, P.J. (2009) Epilithic diatoms (Bacillariophyta) from cloud forest and alpine streams in Bolivia, South America 3: diatoms from Sehuencas, Carrasco National Park, Department of Cochabamba.

Acta Botanica Croatica

68(2), 263-283. WOS:000271400100009

[1.37] Morales, E.A. and Manoylov, K.M. (2009)

Mayamaea cahabaensis

sp. nov. (Bacillariophyceae), a new freshwater diatom from streams in the southern United States.

Proceedings of the Academy of Natural Sciences of Philadelphia

158(1), 49-59.

[1.38] Morales, E.A., Edlund, M.B. and Spaulding, S.A. (2010) Description and ultrastructure of araphid diatom species (Bacillariophyceae) morphologically similar to

Pseudostaurosira elliptica

(Schumann) Edlund

et al. Phycological Research

58(2), 97-107. WOS:000276036300003

[1.39] Morales, E.A., Lücking, R. & Anze, R. 2009. Una introducción al estudio de los líquenes de Bolivia [An introduction to the study of the lichens from Bolivia].

Universidad Católica Boliviana San Pablo. Serie Ecología No. 1.

Cochabamba, Bolivia. 58 pp. ISSN 2076-779X.

[1.39] Morales, E.A., Fernández, E. and Chávez, V.S. (2010) Diatomeas (Bacillariophyta): ¿Por qué debemos incorporarlas en estudios de la biodiversidad boliviana [Diatoms (Bacillariophyta): Why should we incorporate them into Bolivian biodiversity studies?]. In:

Biodiversidad y Ecología en Bolivia, Simposio XXX Aniversario Instituto de Ecología Universidad Mayor de San Andrés

. Plural Editores, La Paz, Bolivia.

[1.40] Morales, E.A. and Manoylov, K.M. (2010) Three new araphid diatoms (Bacillariophyta) from rivers in North America.

Proceedings of the Academy of Natural Sciences of Philadelphia

160(1), 29-46. WOS:000208413100005

[1.41] Morales, E.A., Wetzel, C.E. and Ector, L. (2010) Two short-striated species of

Staurosirella

(Bacillariophyceae) from Indonesia and the United States.

Polish Botanical Journal

55(1), 107-117.

[1.42] Williams, D.M. and Morales, E.A. (2010)

Pseudostaurosira medliniae

, a new name for

Pseudostaurosira elliptica

(Gasse) Jung et Medlin.

Diatom Research

25(1), 225-226. WOS:000277752200019

[1.43] Acs, E., Ector, L., Kiss, K.T., Cserháti, C., Morales, E.A. and Levkov, Z. (2011) Morphological observations and emended description of

Amphora micrometra

from the Bolivian Altiplano, South America.

Diatom Research

26(1-2), 199-212. WOS:000298270200021

[1.44] Cejudo-Figueiras, C., Morales, E.A., Wetzel, C.E., Blanco, S., Hoffmann, L. and Ector, L. (2011) Analysis of the type of

Fragilaria construens

var.

subsalina

(Bacillariophyceae) and description of two morphologically related taxa from Europe and the United States.

Phycologia

50(1), 67-77. WOS:000286357100005

[1.45] Morales, E.A., Ector, L., Fernández, E., Novais, M.H., Hlúbiková, D., Hamilton, P.B. and Kociolek, J.P. (2011) The genus

Achnanthidium

Kütz. (Achnanthales, Bacillariophyceae) in Bolivian streams: A report of taxa found in recent investigations.

Algological Studies

136(1), 89.

[1.46] Taylor, J.C., Morales, E.A. and Ector, L. (2011)

Achnanthidium standeri

(Cholnoky) comb. nov. and

Achnanthidium taiaense

(J. R. Carter et Denny) comb. nov., two new combinations of morphologically similar

Achnanthidium

species from Africa.

Algological Studies

136/137, 151–166.

[1.47] Wojtal, A.Z., Ector, L., Van de Vijver, B., Morales, E.A., Blanco, S., Piatek, J. and Smieja, A. (2011) The

Achnanthidium minutissimum

complex (Bacillariophyceae) in southern Poland.

Algological Studies

, 211-238.

[1.48] Morales, E.A., Manoylov, K.M. and Bahls, L.L. (2012)

Fragilariforma horstii

sp. nov. (Bacillariophyceae) a new araphid species from the northern United States of America.

Nova Hedwigia

, 141-153. WOS:000301990400010

[1.49] Morales, E.A., Novais, M.H., Chávez, G., Hoffmann, L. and Ector, L. (2012) Diatoms (Bacillariophyceae) from the Bolivian Altiplano: Three new araphid species from the Desaguadero River draining Lake Titicaca.

Fottea

12(1), 41-58. WOS:000302453000004

[1.50] Morales, E.A., Rivera, S.F., Pedrazas, D. and Azero, M. (2012) A cinco años de la apertura del Herbario Criptogámico UCB [Five years after the opening of the UCB Cryptogamic Herbarium].

Acta Nova

5(3), 411-414.

[1.51] Morales, E.A., Rivera, S.F., Veizaga, A. and Fiorini, R. (2012)

Didymosphenia geminata

(Lyngbye) M. Schmidt (Bacillariophyta), una especie invasora y potencial amenaza para ecosistemas acuáticos bolivianos [

Didymosphenia geminata

(Lyngbye) M. Schmidt (Bacillariophyta), an invasive species and potential threat to Bolivian aquatic ecosystems].

Acta Nova

5(3), 327-343.

[1.52] Morales, E.A., Wetzel, C.E., Van de Vijver, B., Novais, M.H., Hoffmann, L. and Ector, L. (2012) Examination of type material of araphid diatoms (Bacillariophyta) nomenclaturally associated to

Fragilaria, Staurosira

or

Pseudostaurosira

: A long history of species concept drift. In:

Twentysecond International Diatom Symposium, Aula Academica, Ghent, 26–31 August 2012, Abstracts. Special Publication

. Vol. 58.

[1.53] Solak, C.N., Ector, L., Wojtal, A.Z., Acs, É. and Morales, E.A. (2012) A review of investigations on diatoms (Bacillariophyta) in Turkish inland waters.

Nova Hedwigia

, 431-461. WOS:000301990400025

[1.54] Wetzel, C.E., Lange-Bertalot, H., Morales, E.A., Bicudo, D.D., Hoffmann, L. and Ector, L. (2012)

Bicudoa amazonica

gen. nov. et sp. nov. (Bacillariophyta)-a new freshwater diatom from the Amazon basin with a complete raphe loss in the Eunotioid lineage.

Phytotaxa

75, 1-18. WOS:000312188400001

[1.55] Lücking, R., Dal-Forno, M., Lawrey, J.D., Bungartz, F., Rojas, M.E.H., Hernandez, J.E., Marcelli, M.P., Moncada, B., Morales, E.A., Nelsen, M.P., Paz, E., Salcedo, L., Spielmann, A.A., Wilk, K., Will-Wolf, S. and Yánez-Ayabaca, A. (2013) Ten new species of lichenized Basidiomycota in the genera

Dictyonema

and

Cora

(Agaricales: Hygrophoraceae), with a key to all accepted genera and species in the

Dictyonema

clade.

Phytotaxa

139(1), 1-38. WOS:000325990400001

[1.56] Morales, E.A., Guerrero, J.M., Wetzel, C.E., Sala, S. and Ector, L. (2013) Unraveling the identity of

Fragilaria pinnata

Ehrenberg and

Staurosira pinnata

Ehrenberg: Research in progress on a convoluted story.

Cryptogamie Algologie

34(2), 89-102. WOS:000338714800003

[1.57] Morales, E.A. and Rivera, S.F. (2013) Macrófitas poco frecuentes o desconocidas de la laguna Alalay, Cochabamba, Bolivia [Rare or unknown macrophytes from Alalay Lagoon, Cochabamba, Bolivia].

Acta Nova

6(1-2), 36-52.

[1.58] Morales, E.A., Rivera, S.F., Ayala, R. and Acosta, F. (2013) Ocurrencia de

Cyclotella meduanae

Germain (Bacillariophyta) en la laguna Alalay, un cuerpo de agua salobre y eutrófico (Cochabamba, Bolivia) [Occurrence of

Cyclotella meduanae

Germain (Bacillariophyta) in Alalay Lagoon, a brackish and eutrophic body of water (Cochabamba, Bolivia)].

Acta Nova

6(1-2), 82-93.

[1.59] Rivera, S.F. and Morales, E.A. (2013) Nuevos taxa de diatomeas (Bacillariophyta) descritos en el Herbario Criptogámico de la Universidad Católica Boliviana San Pablo (HCUCB) [New taxa of diatoms (Bacillariophyta) described in the Cryptogamic Herbarium of the Universidad Católica Boliviana San Pablo (HCUCB)].

Acta Nova

6(1-2), 142-152.

[1.60] Rivera, S.F. and Morales, E.A. (2013) Publicaciones científicas del Herbario Criptogámico de la Universidad Católica Boliviana San Pablo (HCUCB) [Scientific publications of the Cryptogamic Herbarium of the Universidad Católica Boliviana San Pablo (HCUCB)].

Acta Nova

6(1-2), 122-141.

[1.61] Wetzel, C.E., Morales, E.A., Blanco, S. and Ector, L. (2013)

Pseudostaurosira cataractarum

comb. nov. (Bacillariophyta): type analysis, ecology and world distribution of a former “centric” diatom.

Acta Nova

6(1-2), 53-63.

[1.62] Wetzel, C.E., Morales, E.A., Hinz, F., Bicudo, D.C. and Ector, L. (2013)

Fragilariforma javanica

comb. nov.: Analysis of type material of a widely reported species with a tropical distribution.

Diatom Research

28(4), 373-379. WOS:000326562100004

[1.63] Bolaños Angulo, A., Azero, M. and Morales, E.A. (2014) Evaluación de la influencia de tres especies: Tunal (

Opuntia ficus-indica

L.), chacatea (Dodonea viscosa Jacq.) y molle (

Schinus molle

L.) sobre las propiedades edáficas de un sistema agroforestal sucesional en Combuyo-Vinto [Evaluation of the influence of three species: Tunal (

Opuntia ficus-indica

L.),

chacatea

(

Dodonea viscosa

Jacq.) and molle (

Schinus molle

L.) on the edaphic properties of a successional agroforestry system in Combuyo-Vinto].

Acta Nova

6(4), 523-524.

[1.64] Buczkó, K., Ognjanova-Rumenova, N., Magyari, E.K., Morales, E.A., Wojtal, A.Z., Magyar, I. and Ector, L. (2014) Structure, biostratigraphy and distribution of

Navicula haueri

Grunow, a Miocene diatom (Bacillariophyta) from the Carpathian Realm.

Nova Hedwigia

, 369-379. WOS:000339535600019

[1.65] Enache, M.D., Potapova, M. and Morales, E.A. (2014)

Platessa strelnikovae

(Bacillariophyta), a new species from Maine and Vermont lakes, USA.

Nova Hedwigia

, 239-244. WOS:000339535600012

[1.66] Khan-Bureau, D.A., Beauchene, M.S., Ector, L., Morales, E.A. and Lewis, L.A. (2014) Observations of two nuisance stalk-forming diatoms (Bacillariophyta) from a river in Connecticut, Northeastern USA:

Didymosphenia

sp. and

Cymbella janischii

(A. Schmidt) De Toni.

Bioinvasions Records

3(3), 139-149. WOS:000372414700002

[1.67] Morales, E.A., Buczkó, K., Wetzel, C.E., Novais, M.H., Ognjanova-Rumenova, N., Hoffmann, L. and Ector, L. (2014) Transfer of

Staurosira grunowii

to

Staurosirella

.

Diatom Research

29(2), 105-110. WOS:000331336600001

[1.68] Morales, E.A., Rivera, S.F., Wetzel, C.E., Novais, M.H., Hamilton, P.B., Hoffmann, L. and Ector, L. (2014) New epiphytic araphid diatoms in the genus

Ulnaria

(Bacillariophyta) from Lake Titicaca, Bolivia.

Diatom Research

29(1), 41-54. WOS:000330933100006

[1.69] Morales, E.A., Wetzel, C.E., Rivera, S.F., Novais, M.H., Hoffmann, L. and Ector, L. (2014)

Craticula strelnikoviana

sp. nov. and

Craticula guaykuruorum

sp. nov. (Bacillariophyta) from South American saline lakes.

Nova Hedwigia

, 223-237. WOS:000339535600011

[1.70] Morales, E.A., Wetzel, C.E., Rivera, S.F., Van de Vijver, B. and Ector, L. (2014) Current taxonomic studies on the diatom flora (Bacillariophyceae) of the Bolivian Altiplano, South America, with possible consequences for palaeoecological assessments.

Journal of Micropalaeontology

33, 121-129. WOS:000343130100003

[1.71] Rioual, P., Morales, E.A., Chu, G.Q., Han, J.T., Li, D., Liu, J.Q., Liu, Q., Mingram, J. and Ector, L. (2014)

Staurosira longwanensis

sp. nov., a new araphid diatom (Bacillariophyta) from Northeast China.

Fottea

14(1), 91-100. WOS:000334587400007

[1.72] Talgatti, D., Wetzel, C.E., Morales, E.A., Ector, L. and Torgan, L.C. (2014) Transfer of

Fragilaria atomus

Hust. to the genus

Stauroforma

(Bacillariophyta) based on observation of type and newly collected material.

Phytotaxa

158(1), 43-56. WOS:000330510600003

[1.73] van de Vijver, B., Morales, E.A. and Kopalová, K. (2014) Three new araphid diatoms (Bacillariophyta) from the Maritime Antarctic Region.

Phytotaxa

167(3), 256-266. WOS:000335889800004

[1.74] Almeida, P.D., Wetzel, C.E., Morales, E.A., Ector, L. and Bicudo, D.C. (2015)

Staurosirella acidophila

sp. nov., a new araphid diatom (Bacillariophyta) from southeastern Brazil: ultrastructure, distribution and autecology.

Cryptogamie Algologie

36(3), 255-270. WOS:000360577500003

[1.75] Grana, L., Morales, E.A., Besta, T., Echazu, D., Wetzel, C.E., Novais, M.H., Rajdlova, H., Ector, L. and Maidana, N.I. (2015) On the geographical distribution and ecology of

Pseudostaurosira cataractarum

(Bacillariophyceae): New findings in the Palearctic and Neotropic ecozones.

Brazilian Journal of Botany

38(4), 809-821. WOS:000368593500013

[1.76] Morales, E.A. (2015) On the synonymy of

Nitzschia frustulum

var.

subsalina, N. inconspicua

and

N. boliviana

sensu Trobajo

et al.

2013.

Acta Nova

8(2), 114-121.

[1.77] Morales, E.A. and Rivera, S.F. (2015) Ocurrencia de

Batrachospermum macrosporum

y su fase Chantransia (=

Audouinella macrospora

) en la cuenca del río Yacuma (Beni, Bolivia) [Occurrence of

Batrachospermum macrosporum

and its Chantransia phase (=

Audouinella macrospora

) in the Yacuma river basin (Beni, Bolivia)].

Acta Nova

7(1), 47-60.

[1.78] Morales, E.A., Rivera, S.F., Lozano, R. and Bicudo, C.E.D.M. (2015) Primer reporte confirmado de

Hydrodictyon reticulatum

(Chlorophyta, Hydrodictyaceae) para Bolivia [First confirmed report of

Hydrodictyon reticulatum

(Chlorophyta, Hydrodictyaceae) for Bolivia].

Acta Nova

7(2), 109-113.

[1.79] Morales, E.A., Rivera, S.F., Rubin, S.D.C., Vis, M.L. and Houk, V. (2015)

Aulacoseira kruegeriana

(Diatomeae, Coscinodiscophyceae): A new centric diatom from high-elevation Andean rivers and streams of Bolivia.

Diatom Research

30(3), 269-277. WOS:000362502400003

[1.80] Morales, E.A., Rivera, S.F., Wetzel, C.E., Hamilton, P.B., Bicudo, D.C., Pibernat, R.A. and Ector, L. (2015) Hipótesis: La agrupación

Microcystis aeruginosa

Kütz.-

Nitzschia palea

(Kütz.) W. Sm.-bacterias en la laguna Alalay, Cochabamba, Bolivia es de tipo simbiótico [Hypothesis: The group

Microcystis aeruginosa

Kütz.-

Nitzschia palea

(Kütz.) W. Sm.bacteria in the Alalay lagoon, Cochabamba, Bolivia is of symbiotic type].

Acta Nova

7(2), 122-142.

[1.81] Morales, E.A., Wetzel, C.E., Van de Vijver, B. and Ector, L. (2015) Morphological studies on type material of widely cited araphid diatoms (Bacillariophyta).

Phycologia

54(5), 455-470. WOS:000365398100004

[1.82] Almeida, P.D., Morales, E.A., Wetzel, C.E., Ector, L. and Bicudo, D.C. (2016) Two new diatoms in the genus

Fragilaria

Lyngbye (Fragilariophyceae) from tropical reservoirs in Brazil and comparison with type material of

F. tenera

.

Phytotaxa

246(3), 163-183. WOS:000370224200001

[1.83] Bicudo, D.C., Tremarin, P.I., Almeida, P.D., Zorzal-Almeida, S., Wengrat, S., Faustino, S.B., Costa, L.F., Bartozek, E.C.R., Rocha, A.C.R., Bicudo, C.E.M. and Morales, E.A. (2016) Ecology and distribution of

Aulacoseira

species (Bacillariophyta) in tropical reservoirs from Brazil.

Diatom Research

31(3), 199-215. WOS:000385847400003

[1.84] Khan-Bureau, D.A., Morales, E.A., Ector, L., Beauchene, M.S. and Lewis, L.A. (2016) Characterization of a new species in the genus

Didymosphenia

and of

Cymbella janischii

(Bacillariophyta) from Connecticut, USA.

European Journal of Phycology

51(2), 203-216. WOS:000373496900008

[1.85] Lücking, R., Nelsen, M.P., Aptroot, A., Barillas De Klee, R., Bawingan, P.A., Benatti, M.N., Binh, N.Q., Bungartz, F., Cáceres, M.E.S., Canêz, L.D., Chaves, J.L., Ertz, D., Esquivel, R.E., Ferraro, L.I., Grijalva, A., Gueidan, C., Hernandez, J.E., Knight, A., Lumbsch, H.T., Marcelli, M.P., Mercado-Díaz, J.A., Moncada, B., Morales, E.A., Naksuwankul, K., Orozco, T., Parnmen, S., Rivas Plata, E., Salazar-Allen, N., Spielmann, A.A. and Ventura, N. (2016) A phylogenetic framework for reassessing generic concepts and species delimitation in the lichenized family Trypetheliaceae (Ascomycota: Dothideomycetes).

Lichenologist

48(6), 739-762. WOS:000390364600008

[1.86] Wengrat, S., Morales, E.A., Wetzel, C.E., Almeida, P.D., Ector, L. and Bicudo, D.C. (2016) Taxonomy and ecology of

Fragilaria billingsii

sp. nov. and analysis of type material of

Synedra rumpens

var.

fusa

(Fragilariaceae, Bacillariophyta) from Brazil.

Phytotaxa

270(3), 191-202. WOS:000382037400003

[1.87] Almeida, P.D., Wetzel, C.E., Morales, E.A., Ector, L. and Bicudo, D.C. (2017) New species and combinations on Fragilariforma (Bacillariophyta) from tropical freshwater environments.

Fottea

17(2), 277-292. WOS:000416485100011

[1.88] García, M.L., Maidana, N.I., Ector, L. and Morales, E.A. (2017)

Staurosira patagonica

sp. nov., a new diatom (Bacillariophyta) from southern Argentina, with a discussion on the genus

Staurosira

Ehrenberg. In:

Diatom Taxonomy and Ecology: From France to the Sub-Antarctic Islands

. B. VanDeVijver, L. Tudesque and L. Ector, (eds.) J Cramer, Stuttgart. 146: 103-123. WOS:000473347500009

[1.89] Khan-Bureau, D.A., Ector, L., Morales, E.A., Wade, E.J. and Lewis, L.A. (2017) Contrasting morphological and DNA barcoding methods for diatom (Bacillariophyta) identification from environmental samples in the Eightmile River in Connecticut, USA. In:

Diatom Taxonomy and Ecology: From France to the Sub-Antarctic Islands

. B. VanDeVijver, L. Tudesque and L. Ector, (eds.) J Cramer, Stuttgart. 146: 279-302. WOS:000473347500020

[1.90] Lücking, R., Dal Forno, M., Moncada, B., Coca, L.F., Vargas-Mendoza, L.Y., Aptroot, A., Arias, L.J., Besal, B., Bungartz, F., Cabrera-Amaya, D.M., Cáceres, M.E.S., Chaves, J.L., Eliasaro, S., Gutiérrez, M.C., Marin, J.E.H., Herrera-Campos, M., Holgado-Rojas, M.E., Jonitz, H., Kukwa, M., Lucheta, F., Madriñán, S., Marcelli, M.P., Martins, S.M.D., Mercado-Díaz, J.A., Molina, J.A., Morales, E.A., Nelson, P.R., Nugra, F., Ortega, F., Paredes, T., Patiño, A.L., Peláez-Pulido, R.N., Pérez, R.E.P., Perlmutter, G.B., Rivas-Plata, E., Robayo, J., Rodríguez, C., Simijaca, D.F., Soto-Medina, E., Spielmann, A.A., Suárez-Corredor, A., Torres, J.M., Vargas, C.A., Yánez-Ayabaca, A., Weerakoon, G., Wilk, K., Pacheco, M.C., Diazgranados, M., Brokamp, G., Borsch, T., Gillevet, P.M., Sikaroodi, M. and Lawrey, J.D. (2017) Turbo-taxonomy to assemble a megadiverse lichen genus: Seventy new species of Cora (Basidiomycota: Agaricales: Hygrophoraceae), honouring David Leslie Hawksworth’s seventieth birthday.

Fungal Diversity

84(1), 139-207. WOS:000403785900007

[1.91] Maidana, N.I., Aponte, G.A., Fey, M., Schäbitz, F. and Morales, E.A. (2017)

Cyclostephanos salsae

and

Placoneis patagonica

, two new diatoms (Bacillariophyta) from Laguna Chaltel in southern Patagonia, Argentina. In:

Diatom Taxonomy and Ecology: From France to the Sub-Antarctic

Islands

. B. VanDeVijver, L. Tudesque and L. Ector, (eds.) J Cramer, Stuttgart. 146: 89-102. WOS:000473347500008

[1.92] Maidana, N.I., Morales, E.A., Bradbury, J.P., Schäbitz, F. and Houk, V. (2017) A new order and family of diatoms: Arcanodiscales, Arcanodiscaceae (Bacillariophyta) to accommodate

Arcanodiscus platti

gen. nov. et sp. nov. from the Argentinian Patagonia. In:

Diatom Taxonomy and Ecology: From France to the Sub-Antarctic Islands [Nova Hedwigia Beiheft 146]

. B. VanDeVijver, L. Tudesque and L. Ector, (eds.) J. Cramer, Stuttgart, Germany. 146: 63-72. WOS:000473347500006

[1.93] Mogul, R., Vaishampayan, P., Bashir, M., McKay, C.P., Schubert, K., Bornaccorsi, R., Gomez, E., Tharayil, S., Payton, G., Capra, J., Andaya, J., Bacon, L., Bargoma, E., Black, D., Boos, K., Brant, M., Chabot, M., Chau, D., Cisneros, J., Chu, G., Curnutt, J., DiMizio, J., Engelbrecht, C., Gott, C., Harnoto, R., Hovanesian, R., Johnson, S., Lavergne, B., Martinez, G., Mans, P., Morales, E., Oei, A., Peplow, G., Piaget, R., Ponce, N., Renteria, E., Rodriguez, V., Rodriguez, J., Santander, M., Sarmiento, K., Scheppelmann, A., Schroter, G., Sexton, D., Stephenson, J., Symer, K., Russo-Tait, T., Weigel, B. and Wilhelm, M.B. (2017) Microbial community and biochemical dynamics of biological soil crusts across a gradient of surface coverage in the central Mojave Desert.

Frontiers in Microbiology

8, #1974. WOS:000413413700001

[1.94] Morales, E.A., Achá, M. and Villarroel, M.L. (2017) En busca de alternativas de alimentación frente al cambio climático: estudio preliminar del impacto nutricional del

Nostoc

en estudiantes de primaria de la comunidad de Putucuni, Cordillera del Tunari, Quillacollo, Cochabamba-Bolivia [In search of food alternatives in the face of climate change: Preliminary study of the nutritional impact of

Nostoc

on primary school students in the community of Putucuni, Cordillera del Tunari, Quillacollo, Cochabamba-Bolivia].

Acta Nova

8(2), 205-215.

[1.95] Morales, E.A., Rivera, S.F., Vildozo, L.H. and Pol, A. (2017) Floración algal nociva (FAN) producida por cianobacterias en la laguna Alalay, Cochabamba, Bolivia [Harmful algal bloom (HAB) produced by cyanobacteria in Alalay Lagoon, Cochabamba, Bolivia].

Acta Nova

8(1), 50-75.

[1.96] Morales, E.A., Rivera, S.F., Vildozo, L.H. and Pol, A. (2017) Harmful algal bloom (HAB) produced by cyanobacteria in Alalay Shallow Lake, Cochabamba, Bolivia.

Acta Nova

8(1), 50-75.

[1.97] Morales, E.A., Rivera, S.F., Wetzel, C.E., Hamilton, P.B., Houk, V. and Ector, L. (2017) A new centric diatom belonging to the

Cyclotella meneghiniana

Kutz. species complex (Bacillariophyta):

Cyclotella longirimoportulata

from Alalay Pond, Cochabamba, Bolivia. In:

Diatom Taxonomy and Ecology: From France to the Sub-Antarctic Islands

. B. VanDeVijver, L. Tudesque and L. Ector, (eds.) J Cramer, Stuttgart. 146: 73-87. WOS:000473347500007

[1.98] Rubin, S.D.C., Marín, I., Gómez, M.J., Morales, E.A., Zekker, I., San Martín-Uriz, P., Rodríguez, N. and Amils, R. (2017) Prokaryotic diversity and community composition in the Salar de Uyuni, a large scale, chaotropic salt flat.

Environmental Microbiology

19(9), 3745-3754. WOS:000410660900027

[1.99] Grana, L., Morales, E.A., Maidana, N.I. and Ector, L. (2018) Two new species of

Staurosira

and

Pseudostaurosira

(Bacillariophyta) from the highlands of Argentina (south-central Andes) and two new nomenclatural combinations.

Phytotaxa

365(1), 60-72. WOS:000442280600002

[1.100] Rusanov, A.G., Ector, L., Morales, E.A., Kiss, K.T. and Acs, É. (2018) Morphometric analyses of

Staurosira inflata

comb. nov. (Bacillariophyceae) and the morphologically related

Staurosira tabellaria

from north-western Russia.

European Journal of Phycology

53(3), 336-349. WOS:000441948900008

[1.101] Seeligmann, C.T., Maidana, N.I. and Morales, E.A. (2018) Fragilariaceae (Bacillariophyta) in high altitude wetlands of Catamarca (Argentina).

Boletin de la Sociedad Argentina de Botanica

53(4), 507-519. WOS:000459326400001

[1.102] García, M.L., Morales, E.A., Guerrero, J.M., Tremarin, P.I. and Maidana, N.I. (2019) New

Aulacoseira

species (Bacillarliphyta) from the Argentinean Patagonia and re-examination of type material of

Melosira perpusilla

Frenguelii.

Phytotaxa

408(3), 161-177. WOS:000473254300002

[1.103] Guerrero, J.M., García, M.L. and Morales, E.A. (2019)

Staurosirella andi-no-patagunica

sp. nov. (Bacillariophyta) from lake sediments in Patagonia, Argentina.

Phytotaxa

402(3), 131-144. WOS:000466483100001

[1.104] Lehmkuhl, E.A., Morales, E.A., Tremarin, P.I., Bartozek, E.C.R., Zorzal-Almeida, S., Ludwig, T.A.V. and Bicudo, C.E.D. (2019) Two new species of

Nitzschia

(Bacillariaceae, Bacillariophyta) from tropical reservoirs of southeastern Brazil.

Phytotaxa

399(1), 83-99. WOS:000462041000009

[1.105] Morales, E.A., Wetzel, C.E., Haworth, E.Y. and Ector, L. (2019) Ending a 175-year taxonomic uncertainty: Description of

Staurosirella neopinnata

sp. nov. (Bacillariophyta) to accommodate

Fragilaria pinnata

, a highly misconstrued taxon with a purported worldwide distribution.

Phytotaxa

402(2), 75-87. WOS:000465412500001

[1.106] Morales, E.A., Wetzel, C.E., Novais, M.H., Buczkó, K., Morais, M.M. and Ector, L. (2019) Morphological reconsideration of the araphid genus

Pseudostaurosira

(Bacillariophyceae), a revision of

Gedaniella, Popovskayella

and

Serratifera

, and a description of a new

Nanofrustulum

species.

Plant Ecology and Evolution

152(2), 262-284. WOS:000475963600013

[1.107] Novais, M.H., Penha, A.M., Morales, E.A., Potes, M., Salgado, R. and Morais, M. (2019) Vertical distribution of benthic diatoms in a large reservoir (Alqueva, Southern Portugal) during thermal stratification.

Science of the Total Environment

659, 1242-1255. WOS:000457293700120

[1.108] Barbosa, L.G., Amorim, C.A., Parra, G., Portinho, J.L., Morais, M., Morales, E.A. and Menezes, R.F. (2020) Advances in limnological research in Earth’s drylands.

Inland Waters

10(4), 429-437. WOS:000581678000001

[1.109] García, M.L., Morales, E.A., Mann, D.G. and Maidana, N.I. (2020)

Sellaphora mayrii

(Bacillariophyceae), a new diatom from the Argentinean Patagonia.

Phytotaxa

437(3), 135-146. WOS:000524757700002

[1.110] Morales, E.A. (2020)

Frustulia tunariensis

sp. nov. (Bacillariophyceae) from the Andes of Bolivia, South America.

Diversity-Basel

12(9), #362. WOS:000581209900001

[1.111] Morales, E.A., Wetzel, C.E., Novais, M.H., Morais, M.M. and Ector, L. (2020)

Nitzschia transtagensis

sp. nov. (Bacillariophyceae) from a spring in Southern Portugal.

Botany Letters

167(1), 32-41. WOS:000496786800001

[1.112] Novais, M.H., Morales, E.A., Penha, A.M., Potes, M., Bouchez, A., Barthès, A., Costa, M.J., Salgado, R., Santos, J. and Morais, M. (2020) Benthic diatom community dynamics in Mediterranean intermittent streams: Effects of water availability and their potential as indicators of dry-phase ecological status.

Science of the Total Environment

719, 19, #137462. WOS:000521936300021

[1.113] Pinto, P., Oliveira, J.M., Leitao, F., Morais, M.M., Chícharo, L., Vaz, P., Delgado, S.M.A., Voreadou, C., Morales, E.A. and Teodósio, M.A. (2020) Development of a metric of aquatic invertebrates for volunteers (MAIV): A simple and friendly biotic metric to assess ecological quality of streams.

Water

12(3), #654. WOS:000529249500039

[1.114] Zorzal-Almeida, S., Bartozek, E.C.R., Morales, E.A. and Bicudo, D.C. (2020)

Brachysira aristidesii

sp. nov. (Bacillariophyceae, Brachysiraceae): A new species from oligotrophic and mesotrophic tropical reservoirs in southeastern Brazil.

Phytotaxa

456(1), 105-113. WOS:000563782900008

[1.115] García, M.L., Bustos, S., Villacís, L.A., Laprida, C., Mayr, C., Moreno, P.I., Maidana, N.I. and Morales, E.A. (2021) New araphid species of the genus

Pseudostaurosira

(Bacillariophyceae) from southern Patagonia.

European Journal of Phycology

56(3), 255-272. WOS:000606927400001

[1.116] Morais, M., Penha, A.M., Novais, M.H., Landim, L., Victória, S.S., Morales, E.A. and Barbosa, L.G. (2021) Some observations on phytoplankton community structure, dynamics and their relationship to water quality in five Santiago Island Reservoirs, Cape Verde.

Water

13(20), #2888. WOS:000716267000001

[1.117] Morales, E., Novais, M.H., García, M.L., Maidana, N.I. and Morais, M.M. (2021)

Planothidum audax

sp. nov. (Bacillariophyta, Achnanthidiaceae), a new diatom from temporary streams in southern Portugal.

Phytotaxa

510(3), 288-294. WOS:000677644400003

[1.118] Morales, E., Wetzel, C. and Ector, L. (2021) New and poorly known “araphid” diatom species (Bacillariophyta) from regions near Lake Titicaca, South America and a discussion on the continued use of morphological characters in “araphid” diatom taxonomy.

PhytoKeys

187, 23-70.

[1.119] Morales, E.A. (2021) Eduardo A. Morales.

https://diatoms.org/contributor/EduardoAMorales

[1.120] Morales, E.A. (2021)

Punctastriata altera

sp. nov. (Bacillariophyta, Fragilariophyceae), a diatom from the United States of America.

Phytotaxa

516(3), 296-300. WOS:000690737800003

[1.121] Morales, E.A., Novais, M.H., García, M.L., Maidana, N.I. and Morais, M.M. (2021) A new species of

Punctastriata

(Bacillariophyta, Fragilariophyceae) from temporary streams in southern Portugal.

Phytotaxa

507(3), 261-265. WOS:000659907900002

[1.122] Morales, E.A., Wetzel, C.E., Ector, L. and Van de Vijver, B. (2021) Analysis of type material of

Opephora pacifica

and emendation of the genus

Opephora

(Bacillariophyta).

Botanica Marina

64(1), 55-69. WOS:000621737800006

[1.123] Harper, M.A., Morales, E.A. and Van De Vijver, B. (2022) An unusual freshwater diatom with bilobate ends from the Mid-Miocene of East Antarctica:

Staurosirella tigris

sp. nov. (Fragilariaceae, Bacillariophyta).

Phytotaxa

541(2), 201-208. WOS:000778751600004

[1.124] Morales, E.A. (2022) Two new species of

Pseudostaurosiropsis

(Bacillariophyta, Fragilario-phyceae) from the United States of America, with taxonomic comments on the genus.

Algae

37(1), 33-47. WOS:000789108500003

[1.125] Morales, E.A., Novais, M.H., Wetzel, C.E., Ector, L. and Morais, M.M. (2022)

Fragilaria odeloucaensis

sp. nov. (Bacillariophyta, Fragilariaceae) a diatom from temporary streams in southern Portugal.

Phytotaxa

555(3), 217-230. WOS:000837197200001

[1.126] Van de Vijver, B., Ector, L., Wetzel, C.E. and Morales, E.A. (2022) Lectotypification of four former

Odontidium

species described by William Smith (Bacillariophyta, Fragilariales).

Notulae Algarum

226, 1-3.

[1.127] Van de Vijver, B., Morales, E.A., Schuster, T.M., Wetzel, C.E. and Ector, L. (2022) Typification and morphology of

Staurosirella lapponica

(Grunow) DM Williams & Round and

Staurosirella pinnata

var.

intercedens

(Grunow) PB Hamilton (Staurosiraceae, Bacillariophyta).

Nova Hedwigia

115(1-2), 31-45. WOS:000814206100001

[1.128] Vouilloud, A.A., Guerrero, J.M. and Morales, E.A. (2022)

Fragilaria pinnata

var.

subcapitata

Frenguelli, typification and current taxonomic status.

Phytotaxa

566(1), 133-139. WOS:000865727300005

[1.129] Khan-Bureau, D.A., Blanco, S., Morales, E.A., Ector, L., Beauchene, M.S. and Lewis, L.A. (2023) Using geometric morphometrics to disentangle

Didymosphenia hullii

and

D. geminata

(Bacillariophyceae) from Connecticut, USA, and two congeneric relatives.

European Journal of Phycology

58(1), 99-109. WOS:000808165100001

[1.130] Morales, E.A. and Manoylov, K.M. (2023)

Achnanthidium lucectorii

sp. nov. and

A. enigmaticum

sp. nov., novel diatoms (Bacillariophyta, Achnanthidiaceae) from Texas, USA.

Phytotaxa

592(1), 1-20. WOS:000980410500001

[1.131] Morales, E.A., Novais, M.E., García, M.L., Maidana, N.I. and Morais, M.M. (2023) Two new species of

Nanofrustulum

(Bacillariophyta) from temporary rivers in the Alentejo region, southern Portugal.

Nova Hedwigia

117(1-4), 71-92.

[1.132] Maidana, N.I., Licursi, M. and Morales, E.A. (eds.) (2024)

Diatom Ecology: from Molecules to Metacommunities [DIEC, Volume in the series: Diatoms: Biology & Applications, series editors: Richard Gordon & Joseph Seckbach, in press, THIS VOLUME].

Wiley-Scrivener, Beverly, MA, USA.

Preface

In recent years, there has been a considerable increase in the amount of research devoted to diatom ecology, with a wide spectrum of approaches. This large amount of information, published in many different journals and books, makes it very difficult for both trained researchers and students to keep up-to-date. Therefore, the idea of bringing together the most recent information on some of the topics related to diatom ecology was enthusiastically promoted by our dear colleague and friend, Eduardo A. Morales.

In order to carry out this project, Eduardo posed a series of questions on relevant topics in diatom ecology and, with these in mind, invited prestigious colleagues from different parts of the world to be part of this adventure, some as authors of chapters and others as reviewers of manuscripts.

The chapters finally included in this book attempt to answer some of the questions raised in the original proposal:

Are diatoms suitable tools for ecological restoration?

What would be the features that make them reliable in this context?

What makes diatoms (so) ecologically successful?

In an ecological sense, why is there such variability in diatom reproductive strategies and why are these worth considering?

What do new approaches in ecological synthesis provide to diatom ecology, biogeography and metacommunities?

Are all diatoms widely distributed and is each species uniquely characterized by its own, unaltered phenotype?

Can we really make any ecological consideration without knowing (with a high degree of certainty) the identity of taxa?

Are urban ecosystems important repositories of biodiversity?

What benefits have been realized due to the progress made in the ecological guilds of diatoms?

Why, how, and when are soil diatoms used in bioindication and what are the benefits of such an approach?

Are diatoms bona fide indicators of climate change?

Are diatom communities in temporary rivers important for these lotic ecosystems as they are subjected to the effects of climate change?

Do diatoms in peatlands behave differently from their terrestrial and aquatic (rivers, lakes, others) counterparts?

Eduardo died in May 2023, and we decided to complete the task and turn it into a tribute to his memory. We hope we have succeeded. For the colleagues (authors and reviewers) who helped us make this possible, we have nothing but words of thanks.

Nora I. MaidanaMagdalena LicursiJuly 2024

1Using Diatoms to Guide Successful Ecological Restoration

Evelyn E. Gaiser

Institute of Environment and Department of Biological Sciences, Florida International University, Miami, Florida, USA

Abstract

The number of aquatic ecosystems severely affected by human activities is rapidly increasing across the globe. Recognition of the extent of degradation of aquatic ecosystems and their services has catalyzed efforts to reverse these trends. To be successful, projects to restore or rehabilitate degraded aquatic ecosystems and their services require explicit achievable goals and regular assessments of progress toward those goals to guide adaptive management. Restoration targets are often established from knowledge of pre-disturbance or reference ecosystem states. Assessment monitoring can then include measurements of chemical and ecological criteria associated with that target. Diatoms have long been employed in assessing ecosystem degradation, particularly water quality deterioration, but there are fewer examples of their use in guiding the goals, assessment, and adaptive management of ecosystem restoration and resilience. This chapter evaluates whether diatoms provide an equally powerful tool for adaptively managing ecosystem restoration and resilience as they do for signaling ecosystem degradation. Examples of successful diatom-based restoration guidance are provided from the Florida Everglades, which is currently undergoing the largest-scale ecosystem restoration program in the world. The chapter also discusses novel approaches for building public literacy about diatoms to encourage more effective and widespread application in successfully rehabilitating and sustaining the planet’s threatened aquatic resources.

Keywords: Diatom indicators, ecological restoration, ecological resilience, Everglades restoration, adaptive management, ecosystem assessment

1.1 Introduction

Aquatic ecosystems are experiencing unprecedented degradation due to human activities, including climate change, widespread damming and diversion, agricultural development, urbanization, overfishing, introduction of non-native species, and pollution from chemicals, erosion, plastics, and solid waste [1.1]. Because of their ubiquity and sensitivity to environmental conditions, diatoms are frequently used to signal the effects of these human activities on aquatic ecosystems, including changes in pH, conductivity, transparency, hydrology, trophic state, oxygen, and nutrients, among other factors [1.2]. Diatoms are considered ecosystem engineers because they drive food webs, form soils, regulate biogeochemical cycles, and modify flow regimes. Because of their fast and reliable response to changes, diatoms also provide important indications of impending ecosystem-scale cascades [1.3]. Early detection and prevention of these cascades is important because they can lead to ecological state shifts that are difficult or almost impossible to reverse [1.4]. In recognition that state shifts often entail undesirable losses in aquatic ecosystem services, many countries have employed diatom-based water quality monitoring programs to identify degrading ecosystems. Targeting degrading ecosystems before they have reached these irreversible states is invaluable. Examples of diatom-based monitoring programs exist throughout North America [1.5] [1.6], Europe [1.7] [1.8] [1.9], and the tropics [1.10] [1.11] [1.12]. Diatoms and other organisms are sounding alarms that we are close to crossing planetary boundaries [1.13], warning of further degradation if widespread actions are not taken to reverse losses. However, comparatively little research has been conducted on (1) how efficiently these diatom signals are acted upon to limit degradation while ecosystems are still in a recoverable state, or (2) whether diatoms can serve as equally effective indicators of ecosystem recovery. This chapter reviews the literature related to these topics, addressing the question: what features make diatoms reliable indicators of ecological recovery, and how can we best use them to guide restoration and management of aquatic ecosystems for resilience in a rapidly changing world?

Determining whether and how diatoms can be used to guide more effective aquatic ecosystem management depends on how well they meet the needs of restoration managers. Those needs include: (1) reliable ecological condition targets based on pre-degradation, reference, and/or predicted (and achievable) desired conditions, (2) accurate indication of whether restoration actions are nearing or achieving target conditions, and also (3) clear and easily understood presentation of results to resource managers and the public, who finance and depend on the results [1.14]. This chapter addresses the key components of successful restoration programs and the desired features of diatom bioindicators that best help guide the restoration process.

While incorporation of diatoms into bioassessment of ecosystem recovery has received much less attention than their use in assessing risk of degradation [1.15], multiple studies have incorporated diatoms in establishing targets and assessing and communicating restoration progress. These studies include bioassessments of lakes, rivers, and wetlands undergoing restoration, which are often coupled with paleoecological, experimental, and modeling studies that have been used to establish targets and metrics. This chapter reviews these studies with a focus on the Florida Everglades, which is currently subject to the largest-scale global ecosystem restoration project ever attempted. The qualities of diatoms that best serve the needs of restoration managers are evaluated and then strategies are recommended for incorporating these qualities into restoration planning, assessments of ecosystem recovery and resilience, science communication, and engagement with the public.

1.2 Components of Successful Ecosystem Restoration

Ecological restoration is defined as an “intentional activity that initiates or accelerates the recovery of an ecosystem with respect to its health, integrity and sustainability” [1.16]. The process of restoring ecosystems typically entails phases of planning and design, implementation, monitoring and assessment, and evaluation to adaptively manage progress [1.17] [1.18]. The planning and design phase establishes objectives to scientifically evaluate the causes of degradation and propose actions necessary to reverse degradation to achieve desired ecosystem conditions [1.19]. Ideally, restoration plans are co-produced by scientists and stakeholders working together to generate targets that account for scientific and societal constraints and benefits [1.20] (Figure 1.1). Restoration targets are commonly based on biological conditions indicative of healthy ecosystem status, as determined from long-term data, historical knowledge, paleoecological information, or reference/undisturbed neighboring ecosystems. However, targets based on pre-disturbance baselines are not always achievable because most ecosystems are complex adaptive systems where more than one key driver is changing, including drivers that are irreversible at the scale of the restoration project [1.21]. For example, global climate change and non-native species introductions can continue to alter ecosystems even as local-scale drivers are being restored. In addition, most degraded ecosystems are so highly disturbed that they have lost critical features that are unrecoverable in realistic restoration timeframes, prompting use of more realistic terms like “rehabilitation” or “recovery” in the restoration science community [1.22