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This topical reference and handbook addresses the chemistry, pharmacology, toxicology and the patentability of prodrugs, perfectly mirroring the integrated approach prevalent in today's drug design. It summarizes current experiences and strategies for the rational design of prodrugs, beginning at the early stages of the development process, as well as discussing organ- and site-selective prodrugs. Every company employing medicinal chemists will be interested in this practice-oriented overview of a key strategy in modern drug discovery and development.
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Seitenzahl: 903
Veröffentlichungsjahr: 2010
Contents
Cover
Methods and Principles in Medicinal Chemistry
Title Page
Copyright
List of Contributors
Preface
A Personal Foreword
Part One: Prodrug Design and Intellectual Property
Chapter 1: Prodrug Strategies in Drug Design
1.1 Prodrug Concept
1.2 Basics of Prodrug Design
1.3 Rationale for Prodrug Design
1.4 History of Prodrug Design
1.5 Recently Marketed Prodrugs
1.6 Concluding Remarks
References
Chapter 2: The Molecular Design of Prodrugs by Functional Group
2.1 Introduction
2.2 The Prodrug Concept and Basics of Design
2.3 Common Functional Group Approaches in Prodrug Design
2.4 Conclusions
References
Chapter 3: Intellectual Property Primer on Pharmaceutical Patents with a Special Emphasis on Prodrugs and Metabolites
3.1 Introduction
3.2 Patents and FDA Approval Process
3.3 Obtaining a Patent
3.4 Conclusion
Part Two: Prodrugs Addressing ADMET Issues
Chapter 4: Increasing Lipophilicity for Oral Drug Delivery
4.1 Introduction
pKa, Degree of Ionization, Partition Coefficient, and Distribution Coefficient
4.3 Prodrug Strategies to Enhance Lipid Solubility
4.4 Prodrug Examples for Antibiotics
4.5 Antiviral Related Prodrugs
4.6 Cardiovascular Related Prodrugs
4.7 Lipophilic Prodrugs of Benzamidine Drugs
4.8 Miscellaneous Examples
4.9 Summary and Conclusion
References
Chapter 5: Modulating Solubility Through Prodrugs for Oral and IV Drug Delivery
5.1 Introduction
5.2 Basics of Solubility and Oral/IV Drug Delivery
5.3 Prodrug Applications for Enhanced Aqueous Solubility
5.4 Challenges with Solubilizing Prodrugs of Insoluble Drugs
5.5 Additional Applications of Prodrugs for Modulating Solubility
5.6 Parallel Exploration of Analogues and Prodrugs in Drug Discovery (Commentary)
5.7 Conclusions
References
Chapter 6: Prodrugs Designed to Target Transporters for Oral Drug Delivery
6.1 Introduction
6.2 Serendipity: An Actively Transported Prodrug
6.3 Requirements for Actively Transported Prodrugs
6.4 Peptide Transporters: PEPT1 and PEPT2
6.5 Monocarboxylate Transporters
6.6 Bile Acid Transporters
6.7 Conclusions
References
Chapter 7: Topical and Transdermal Delivery Using Prodrugs: Mechanism of Enhancement
7.1 Introduction
7.2 Arrangement of Water in the Stratum Corneum
7.3 A New Model for Diffusion Through the Stratum Corneum: The Biphasic Solubility Model
7.4 Equations for Quantifying Effects of Solubility on Diffusion Through the Stratum Corneum
7.5 Design of Prodrugs for Topical and Transdermal Delivery Based on the Biphasic Solubility Model
7.6 Comparison of Human and Mouse Skin Experiments
7.7 Summary
References
Chapter 8: Ocular Delivery Using Prodrugs
8.1 Introduction
8.2 Criteria for an Ideal Ophthalmic Prodrug
8.3 Anatomy and Physiology of the Eye
8.4 Barriers to Ocular Drug Delivery
8.5 Influx and Efflux Transporters on the Eye
8.6 Transporter-Targeted Prodrug Approach
8.7 Drug Disposition in Ocular Delivery
8.8 Effect of Physiochemical Factors on Drug Disposition in Eye
8.9 Prodrug Strategy to Improve Ocular Bioavailability (Nontransporter-Targeted Approach)
8.10 Recent Patents and Marketed Ocular Prodrugs
8.11 Novel Formulation Approaches for Sustained Delivery of Prodrugs
8.12 Conclusion
Acknowledgments
References
Chapter 9: Reducing Presystemic Drug Metabolism
9.1 Introduction
9.2 Presystemic Metabolic Barriers
9.3 Prodrug Approaches to Reduce Presystemic Drug Metabolism
9.4 Targeting Colon
9.5 Targeting Lymphatic Route
9.6 Conclusion
References
Chapter 10: Enzyme-Activated Prodrug Strategies for Site-Selective Drug Delivery
10.1 Introduction
10.2 General Requirements for Enzyme-Activated Targeted Prodrug Strategy
10.3 Examples of Targeted Prodrug Strategies
10.4 Summary
Acknowledgment
References
Chapter 11: Prodrug Approaches for Central Nervous System Delivery
11.1 Blood–Brain Barrier in CNS Drug Development
11.2 Prodrug Strategies
11.3 Prodrug Strategies Based Upon BBB Nutrient Transporters
11.4 Prodrug Strategies Based Upon BBB Receptors
11.5 CNS Prodrug Summary
Acknowledgments
References
Chapter 12: Directed Enzyme Prodrug Therapies
12.1 Introduction
12.2 Theoretical Background of DEPT
12.3 Comparison of ADEPT and GDEPT
12.4 Enzymes in ADEPT and GDEPT
12.5 Design of Prodrugs
12.6 Strategies Used for the Improvement of DEPT Systems
12.7 Biological Data for ADEPT and GDEPT
12.8 Conclusions
Acknowledgments
References
Part Three: Codrugs and Soft Drugs
Chapter 13: Improving the Use of Drug Combinations Through the Codrug Approach
13.1 Codrugs and Codrug Strategy
13.2 Ideal Codrug Characteristics
13.3 Examples of Marketed Codrugs
13.4 Topical Codrug Therapy for the Treatment of Ophthalmic Diseases
13.5 Codrugs for Transdermal Delivery
13.6 Codrugs of L-DOPA for the Treatment of Parkinson's Disease
13.7 Analgesic Codrugs Containing Nonsteroidal Anti-Inflammatory Agents
13.8 Analgesic Codrugs of Opioids and Cannabinoids
13.9 Codrugs Containing Anti-HIV Drugs
References
Chapter 14: Soft Drugs
14.1 Introduction
14.2 Indications
14.3 Design Considerations
14.4 Case Study: The Discovery of Esmolol
14.5 Summary
References
Part Four: Preclinical and Clinical Consideration for Prodrugs
Chapter 15: Pharmacokinetic and Biopharmaceutical Considerations in Prodrug Discovery and Development
15.1 Introduction
15.2 Understanding Pharmacokinetic/Pharmacodynamic Relationships
15.3 Pharmacokinetics
15.4 Tools for the Prodrug Scientist
15.5 Enzymes Involved with Prodrug Conversion
15.6 Use of the Caco-2 System for Permeability and Active Transport Evaluation
15.7 XP13512: Improving PK Performance by Targeting Active Transport
15.8 Prodrug Absorption: Transport/Metabolic Conversion Interplay
15.9 Preabsorptive Degradation
15.10 Biopharmaceutical-Based PK Modeling for Prodrug Design
15.11 Conclusions
References
Chapter 16: The Impact of Pharmacogenetics on the Clinical Outcomes of Prodrugs
16.1 Introduction
16.2 Clopidogrel and CYP2C19
16.3 Codeine and CYP2D6
16.4 Tamoxifen and CYP2D6
16.5 Fluorouracil Prodrugs and Carboxylesterase
16.6 Irinotecan and Carboxylesterase 2
16.7 Others
16.8 Drug Development Implication
16.9 Conclusions
References
Index
Methods and Principles in Medicinal Chemistry
Edited by R. Mannhold, H. Kubinyi, G. Folkers
Editorial Board
H. Buschmann, H. Timmerman, H. van de Waterbeemd, T. Wieland
Previous Volumes of this Series:
Smit, Martine J. / Lira, Sergio A. / Leurs, Rob (Eds.)
Chemokine Receptors as Drug Targets
2011
ISBN: 978-3-527-32118-6
Vol. 46
Ghosh, Arun K. (Ed.)
Aspartic Acid Proteases as Therapeutic Targets
2010
ISBN: 978-3-527-31811-7
Vol. 45
Ecker, Gerhard F. / Chiba, Peter (Eds.)
Transporters as Drug Carriers
Structure, Function, Substrates
2009
ISBN: 978-3-527-31661-8
Vol. 44
Faller, Bernhard / Urban, Laszlo (Eds.)
Hit and Lead Profiling
Identification and Optimization of Drug-like Molecules
2009
ISBN: 978-3-527-32331-9
Vol. 43
Sippl, Wolfgang / Jung, Manfred (Eds.)
Epigenetic Targets in Drug Discovery
2009
ISBN: 978-3-527-32355-5
Vol. 42
Todeschini, Roberto / Consonni, Viviana
Molecular Descriptors for Chemoinformatics
Volume I: Alphabetical Listing /
Volume II: Appendices, References
2009
ISBN: 978-3-527-31852-0
Vol. 41
van de Waterbeemd, Han / Testa, Bernard (Eds.)
Drug Bioavailability
Estimation of Solubility, Permeability, Absorption and Bioavailability
Second, Completely Revised Edition
2008
ISBN: 978-3-527-32051-6
Vol. 40
Ottow, Eckhard/Weinmann, Hilmar (Eds.)
Nuclear Receptors as Drug Targets
2008
ISBN: 978-3-527-31872-8
Vol. 39
Vaz, Roy J. / Klabunde, Thomas (Eds.)
Antitargets
Prediction and Prevention of Drug Side Effects
2008
ISBN: 978-3-527-31821-6
Vol. 38
Mannhold, Raimund (Ed.)
Molecular Drug Properties
Measurement and Prediction
2007
ISBN: 978-3-527-31755-4
Vol. 37
Series Editors
Prof. Dr. Raimund Mannhold
Molecular Drug Research Group
Heinrich-Heine-Universität
Universitätsstrasse 1
40225 Düsseldorf
Germany
Prof. Dr. Hugo Kubinyi
Donnersbergstrasse 9
67256 Weisenheim am Sand
Germany
Prof. Dr. Gerd Folkers
Collegium Helveticum
STW/ETH Zurich
8092 Zurich
Switzerland
Volume Editor
Prof. Dr. Jarkko Rautio
University of Eastern Finland
School of Pharmacy
Yliopistonranta 1
70211 Kuopio
Finland
Cover Description
Prodrugs are bioreversible derivatives of drug molecules that can address ADME issues (“backbone”) and must undergo an enzymatic and/or chemical transformation in vivo to release the pharmacologically active parent drug. A representative prodrug is oseltamivir (Tamiflu®).
(Laskowski anatomy taken with courtesy of the U.S. National Library of Medicine)
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© 2011 WILEY-VCH Verlag & Co. KGaA, Boschstr. 12, 69469 Weinheim, Germany
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ISBN: 978-3-527-32603-7
List of Contributors
Jane P.F. Bai
US Food and Drug Administration
Center for Drug Evaluation and Research
Office of Translational Science
Office of Clinical Pharmacology
10903 New Hampshire, Ave.
Silver Spring
MD 20993
USA
Eyal H. Barash
Barash Law LLC
3000 Kent Avenue
West Lafayette
IN 47906
USA
Ujjwal Chakraborty
University of Kentucky
Department of Chemistry
Lexington
KY 40536-0082
USA
Peter A. Crooks
University of Kentucky
College of Pharmacy
Department of Pharmaceutical Sciences
Lexington
KY 40536-0082
USA
Harpreet K. Dhooper
University of Kentucky
Department of Chemistry
Lexington
KY 40536-0082
USA
Paul W. Erhardt
The University of Toledo College of Pharmacy
Center for Drug Design and Development
Toledo
OH
USA
Ripal Gaudana
University of Missouri-Kansas City
School of Pharmacy
Division of Pharmaceutical Sciences
Kansas City
MO
USA
Victor R. Guarino
Bristol-Myers Squibb
Pharmaceutical Candidate
Optimization
Princeton
NJ 08543
USA
Douglas Hedley
Institute of Cancer Research
CRC Centre for Cancer Therapeutics
15 Cotswold Road
Sutton
Surrey SM2 5NG
UK
Kristiina Huttunen
University of Eastern Finland
School of Pharmacy
Yliopistonranta 1
FI-70211 Kuopio
Finland
Jwala Jwala
University of Missouri-Kansas City
School of Pharmacy
Division of Pharmaceutical Sciences
Kansas City
MO
USA
Deep Kwatra
University of Missouri-Kansas City
School of Pharmacy
Division of Pharmaceutical Sciences
Kansas City
MO
USA
Krista Laine
University of Eastern Finland
School of Pharmacy
Yliopistonranta 1
FI-70211 Kuopio
Finland
Lawrence L. Lesko
US Food and Drug Administration
Center for Drug Evaluation and Research
Office of Translational Science
Office of Clinical Pharmacology
10903 New Hampshire, Ave.
Silver Spring
MD 20993
USA
Paul R. Lockman
Texas Tech University Health Sciences Center
Department of Pharmaceutical Sciences
1406 Coulter
Amarillo
TX 79106
USA
Susruta Majumdar
Memorial Sloan
Kettering Cancer Center
Laboratory of Chemistry, Pharmacology,
and Neuroscience
1275 York Avenue
New York
NY 10021
USA
Ashim K. Mitra
University of Missouri-Kansas City
School of Pharmacy
Division of Pharmaceutical Sciences
Kansas City
MO
USA
Majid Y. Moridani
Texas Tech University
Health Sciences Center
Amarillo
TX 79106
USA
Gabriel Negoita-Giras
Institute of Cancer Research
CRC Centre for Cancer Therapeutics
15 Cotswold Road
Sutton
Surrey SM2 5NG
UK
Dan Niculescu-Duvaz
Institute of Cancer Research
CRC Centre for Cancer Therapeutics
15 Cotswold Road
Sutton
Surrey SM2 5NG
UK
John P. O'Donnell
Pfizer Global Research and Development
Department of Antibacterials Research
Eastern Point Road
Groton
CT 06340
USA
Mike Pacanowski
US Food and Drug Administration
Center for Drug Evaluation and Research
Office of Translational Science
Office of Clinical Pharmacology
10903 New Hampshire, Ave.
Silver Spring
MD 20993
USA
Atiqur Rahman
US Food and Drug Administration
Center for Drug Evaluation and Research
Office of Translational Science
Office of Clinical Pharmacology
10903 New Hampshire, Ave.
Silver Spring
MD 20993
USA
Jarkko Rautio
University of Eastern Finland
School of Pharmacy
Yliopistonranta 1
FI-70211 Kuopio
Finland
Michael D. Reese
The University of Toledo College of Pharmacy
Center for Drug Design and Development
Toledo
OH
USA
Kenneth Sloan
University of Florida
Department of Medicinal Chemistry
1600 SW Archer Road P6-20
Gainesville
FL 32610
USA
Quentin R. Smith
Texas Tech University
Health Sciences Center
Department of Pharmaceutical Sciences
1406 Coulter
Amarillo
TX 79106
USA
Caroline J. Springer
Institute of Cancer Research
CRC Centre for Cancer Therapeutics
15 Cotswold Road
Sutton
Surrey SM2 5NG
UK
Ravi Vaishya
University of Missouri-Kansas City
School of Pharmacy
Division of Pharmaceutical Sciences
Kansas City
MO
USA
Scott C. Wasdo
University of Florida
Department of Anesthesiology
1600 SW Archer Road M5-16
Gainesville
FL 32610
USA
Mark S. Warren
XenoPort, Inc.
3410 Central Expressway
Santa Clara
CA 95051
USA
Preface
Historically, biological screening of new compounds was performed in animals. Application by the enteral route automatically provided a first overview on bioavailability and biological half-life. Nowadays, lead structure search and optimization are dominated by in vitro screening systems. Correspondingly, problems in compound liberation, oral absorption, organ distribution, metabolism, and excretion (LADME) are often observed at a relatively late stage. The problems may already result either from inappropriate lead structure selection or from unidirectional affinity optimization, without sufficient consideration for solubility, permeation properties, and metabolic stability. However, there are many options to rescue a preclinical candidate with such problems. Liberation can be enhanced by increasing the solubility via the formation of polar derivatives, for example, phosphates, reduction of carbonyl to hydroxyl groups, or introduction of polar, most often basic residues, where they do not negatively interfere with binding. Absorption can be enhanced by making the compound more lipophilic in first line by the conversion of acids into esters. Distribution can be influenced by using transporters, for example, for the blood–brain barrier penetration of L-DOPA, or by designing compounds that are preferentially metabolized in a certain organ or tumor, for example, omeprazole or capecitabine. Metabolism can be easily controlled by avoiding or introducing metabolically labile groups.
Prodrugs are inactive or less active drug analogues or derivatives that have better physicochemical or pharmacokinetic properties than their parent drugs. They are more or less specifically metabolized to the active form of the drug. There are manifold reasons for the development of a prodrug. In most cases, prodrugs are designed for a drug that is not sufficiently bioavailable. Other reasons are that the drug does not permeate the blood–brain barrier, the drug has poor solubility or taste, the drug has no sufficient chemical stability, or the drug has no sufficient organ or cell specificity. Soft drugs (sometimes also called antedrugs) are drugs with very short half-life or without systemic activity. Some esters of corticosteroid carboxylic acids are topically active; after dermal absorption, they are metabolically degraded to inactive analogues, in this manner avoiding systemic side effects. Targeted drugs are drugs or prodrugs that exert their biological action only in certain organs or cells.
We are very grateful to Jarkko Rautio, who assembled a team of leading experts to discuss all these concepts. In a comprehensive manner, strategies are presented to rescue a drug candidate with insufficient ADME properties. For this purpose, the book is well suited both for all practitioners in medicinal chemistry and for graduate students who want to learn about rational concepts of lead structure optimization. We are also grateful to Frank Weinreich and Nicola Oberbeckmann-Winter for their ongoing support and enthusiasm for our book series, Methods and Principles in Medicinal Chemistry, of which this book is another highlight.
October 2010
Raimund Mannhold, Düsseldorf
Hugo Kubinyi, Weisenheim am Sand
Gerd Folkers, Zurich
A Personal Foreword
The prodrug concept, as first introduced by Adrian Albert in the 1950s, defines a prodrug as a pharmacologically inactive agent that undergoes an enzymatic and/or chemical transformation in vivo to a therapeutically active drug. Prodrug strategies have traditionally been used to address ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties and risks of marketed drugs or as a tool in late-stage problem solving for drug development candidates. However, prodrugs are now increasingly being integrated into early drug discovery. Indeed, the successful application of prodrug strategies over the past two decades has significantly increased the percentage of drugs approved as prodrugs to an eye-catching 10%. In addition, the percentage of prodrugs among the world's top-selling drugs is particularly high, including blockbusters such as all the proton pump inhibitor “prazoles,” the antiplatelet agent clopidogrel, and the hypercholesterolemia drugs simvastatin and fenofibrate, to name a few.
The success of prodrugs can also be seen in the literature. Books, book chapters, and numerous research and review articles have been published in recent years, with the compilation of the prodrug two-volume book in 2007 by AAPS Press/Springer and edited by Professor Valentino Stella et al. certainly providing the most comprehensive overview of early and current prodrug strategies. So why do we need a new book on prodrugs so soon? The idea of this new prodrug book was mulled over by several prodrug enthusiasts, and it soon became obvious that there are topics that are not really addressed in the existing works. Moreover, I think the more perspectives we can explore on strategies suitable for a prodrug approach, or when they should not be pursued, the better off we will be scientifically. Thus, with some trepidation regarding content, especially trying to avoid extensive redundancy, the task was indeed found worth rewarding and invigorating.
This volume of Methods and Principles in Medicinal Chemistry contains various strategies for prodrug design and highlights many examples of prodrugs that either have been launched or are undergoing experimental assessment. Part One begins with a historical overview and is followed by approaches of prodrug design and the concepts of prodrug patentability. Part Two focuses on the ADMET issues that can be addressed by prodrugs, ranging from permeability and solubility to targeting. In Part Three, the emphasis is on codrugs, which consist of two active drugs incorporated into a single chemical entity, and soft drugs, which in contrast to prodrugs are designed to undergo inactivation after their biotransformation. Both prodrugs and soft drugs rely upon biotransformation to dictate their course of activation and are worth discussing in the same context. Part Four is devoted to preclinical and clinical considerations for prodrugs providing a discovery screening strategy for evaluation of prodrugs and pharmacogenetic focus for prodrugs.
I want to express my sincere gratitude to all authors for their excellent efforts and cooperation. It has been a pleasure for me to be involved with all of these high-profile prodrug enthusiasts. I also want to acknowledge the people at Wiley-VCH, namely, Dr Nicola Oberbeckmann-Winter for her tireless support in the production of this book and Dr Hugo Kubinyi for his valuable advice on its content. I truly hope that this book will stimulate multidisciplinary teams of medicinal chemists, biologists, and other scientists in drug design and development process to consider a prodrug approach as a rational tool in drug discovery that will ultimately lead to better drugs.
October 2010
Jarkko Rautio, Kuopio
Part One
Prodrug Design and Intellectual Property