Essential Reagents for Organic Synthesis - Philip L. Fuchs - E-Book

Essential Reagents for Organic Synthesis E-Book

Philip L. Fuchs

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Beschreibung

From Boron Trifluoride to Zinc, the 52 most widely used reagents in organic synthesis are described in this unique desktop reference for every organic chemist. The list of reagents contains classics such as N-Bromosuccinimide (NBS) and Trifluoromethanesulfonic Acid side by side with recently developed ones like Pinacolborane and Tetra-n-propylammonium Perruthenate (TPAP). For each reagent, a concise article provides a brief description of all important reactions for which the reagent is being used, including yields and reaction conditions, an overview of the physical properties of the reagent, its storage conditions, safe handling, laboratory synthesis and purification methods. Advantages and disadvantages of the reagent compared to alternative synthesis methods are also discussed. Reagents have been hand-picked from among the 5000 reagents contained in EROS, the Encyclopedia of Reagents for Organic Synthesis. Every organic chemist should be familiar with these key reagents that can make almost every reaction work.

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Contents

Cover

e-EROS Editorial Board

Title Page

Copyright

Preface

Short Note on InChIs and InChIKeys

General Abbreviations

Bis(dibenzylideneacetone)palladium(0)

Original Commentary

First Update

Second Update

9-Borabicyclo[3.3.1]nonane Dimer

Original Commentary

Boron Trifluoride Etherate

N-Bromosuccinimide

Original Commentary

First Update

n-Butyllithium

Original Commentary

First Update

N,N′-Carbonyl Diimidazole

Original Commentary

First Update

Cerium (IV) Ammonium Nitrate

Original Commentary

First Update

m-Chloroperbenzoic Acid

Original Commentary

First Update

N-Chlorosuccinimide

Original Commentary

First Update

Second Update

Chlorotrimethylsilane

Original Commentary

First Update

Chlorotris(triphenylphosphine)-rhodium(I)

Original Commentary

First Update

(Diacetoxyiodo)benzene

Original Commentary

First Update

Diazomethane

Methylation of Heteroatoms

Esterification of Carboxylic Acids and Other Acidic Functional Groups

Methylation of Alcohols and Other Less Acidic Functional Groups

The Arndt–Eistert Synthesis

Other Reactions of α-Diazo Ketones Derived from Diazomethane

The Vinylogous Wolff Rearrangement

Insertions into Aldehyde C–H Bonds

Additions to Ketones

Cycloadditions with Diazomethane

Additions to Electron-Deficient Species

Miscellaneous Reactions

Related Reagents

2,3-Dichloro-5,6-dicyano-1,4-benzo-quinone

Original Commentary

First Update

Diisobutylaluminum Hydride

Original Commentary

First Update

4-Dimethylaminopyridine

Original Commentary

First Update

Dimethyldioxirane

Original Commentary

First Update

1-Ethyl-3-(3′-dimethylaminopropyl)carbodiimide Hydrochloride

Peptide Coupling Reagent

Amide Formation

Ester Formation

Protein Modification

Oxidation of Primary Alcohols

Miscellaneous Reactions

Related Reagents

N-Iodosuccinimide

Original Commentary

First Update

Second Update

Iodotrimethylsilane

Original Commentary

First Update

2-Iodoxybenzoic acid

Lithium Aluminum Hydride

Original Commentary

First Update

Lithium Diisopropylamide1, 2

Original Commentary

First Update

Lithium Naphthalenide

Original Commentary

Manganese Dioxide

Osmium Tetroxide

First Update

Second Update

Oxalyl Chloride

Original Commentary

First Update

Oxalyl Chloride–Dimethylformamide

Ozone

Original Commentary

First Update

Pinacolborane

Original Commentary

First Update

Potassium Hexamethyldisilazide

Original Commentary

First Update

Second Update

Potassium Monoperoxysulfate

Original Commentary

First Update

Second Update

Potassium tert-Butoxide

Original Commentary

First Update

Ruthenium(II), Tris(2,2′-bipyridine-κN1,κN1′)-, (OC-6-11)-

Samarium(II) Iodide

Original Commentary

First Update

Scandium Trifluoromethanesulfonate

Sodium Azide

Original Commentary

First Update

Sodium Borohydride

Original Commentary

First Update

Second Update

Sodium Cyanoborohydride

Original Commentary

First Update

Sodium Hexamethyldisilazide

Original Commentary

First Update

Sodium Hydride

Original Commentary

First Update

Sodium Periodate

Original Commentary

First Update

Tetrabutylammonium Fluoride

Original Commentary

Tetrakis(triphenylphosphine)palladium(0)

Tetra-n-propylammonium Perruthenate

Original Commentary

First Update

p-Toluenesulfonyl Chloride

Original Commentary

First Update

Triethylsilane

Original Commentary

First Update

Trifluoromethanesulfonic Acid

Original Commentary

First Update

Trifluoromethanesulfonic Anhydride

Original Commentary

First Update

Second Update

Trimethylsilyl Trifluoromethane sulfonate

Original Commentary

First Update

Trimethylsilyldiazomethane

Original Commentary

First Update

Zinc–Acetic Acid

List of Contributors

Index

End User License Agreement

List of Tables

Table 1

Table 2

Table 1

Table 2

Table 1

Table 1

Table 2

List of Illustrations

Scheme 1

Scheme 1

Scheme 2

Scheme 3

Scheme 4

Scheme 5

Scheme 6

Scheme 7

Scheme 8

Scheme 9

Scheme 10

Scheme 11

Scheme 12

Scheme 13

Scheme 14

Scheme 15

Scheme 16

Scheme 17

Scheme 18

Scheme 19

Scheme 21

Scheme 22

Scheme 23

Scheme 1

Scheme 2

Guide

Cover

Table of Contents

Begin Reading

Chapter 1

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e-EROS Editorial Board

Editor-in-ChiefPhilip L. FuchsPurdue University, West Lafayette, IN, USA

Executive EditorsAndré B. CharetteUniversité de Montréal, Montréal, Québec, Canada

Tomislav RovisColorado State University, Fort Collins, CO, USA

Jeffrey W. BodeETH Zürich, Switzerland

Founding EditorLeo A. PaquetteThe Ohio State University, Columbus, OH, USA

Essential Reagents for Organic Synthesis

Edited by

Philip L. Fuchs

Purdue University, West Lafayette, IN, USA

André B. Charette

Université de Montréal, Montréal, Québec, Canada

Tomislav Rovis

Colorado State University, Fort Collins, CO, USA

Jeffrey W. Bode

ETH Zürich, Switzerland

This edition first published 2016 © 2016 John Wiley & Sons Ltd

Registered officeJohn Wiley & Sons Ltd, The Atrium, Southern Gate, Chichester, West Sussex, PO19 8SQ,United Kingdom

For details of our global editorial offices, for customer services and for information about how to apply for permission to reuse the copyright material in this book please see our website at www.wiley.com.

The right of the author to be identified as the author of this work has been asserted in accordance with the Copyright, Designs and Patents Act 1988.

All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, except as permitted by the UK Copyright, Designs and Patents Act 1988, without the prior permission of the publisher.

Wiley also publishes its books in a variety of electronic formats. Some content that appears in print may not be available in electronic books.

Designations used by companies to distinguish their products are often claimed as trademarks. All brand names and product names used in this book are trade names, service marks, trademarks or registered trademarks of their respective owners. The publisher is not associated with any product or vendor mentioned in this book. This publication is designed to provide accurate and authoritative information in regard to the subject matter covered. It is sold on the understanding that the publisher is not engaged in rendering professional services. If professional advice or other expert assistance is required, the services of a competent professional should be sought.

Library of Congress Cataloging-in-Publication Data

Names: Fuchs, Philip L., 1945- editor. | Charette, A. B. (André B.), 1961- editor. | Rovis, Tomislav, 1968- editor. | Bode, J. W. (Jeffrey W.), editor.

Title: Essential reagents for organic synthesis / edited by Philip L. Fuchs, Andre B. Charette, Tomislav Rovis, Jeffrey W. Bode.

Description: Chichester, UK ; Hoboken, NJ : John Wiley & Sons, 2016. | Includes index.

Identifiers: LCCN 2016021468| ISBN 9781119278306 (paperback) | ISBN 9781119279877 (epub)

Subjects: LCSH: Chemical tests and reagents. | Organic compounds–Synthesis.

Classification: LCC QD77 .E77 2016 | DDC 547/.2–dc23 LC record available at https://lccn.loc.gov/2016021468

A catalogue record for this book is available from the British Library.

ISBN: 9781119179573

Preface

This handbook is a subset of the Encyclopedia of Reagents for Organic Synthesis (EROS), a knowledge base with detailed information on organic-chemical reagents and catalysts. As of mid-2016, the online collection offers reviews on 4959 different reagents and catalysts that are regularly updated. To keep up with the continual evolution in the field, about 200 new or updated reagent articles are added per year to the online database.

In addition to the complete collection that is available only online (see http://wileyonlinelibrary.com/ref/eros), a number of highly focused single-volume handbooks in print and electronic format on editor-selected subjects have been published (Handbook for Reagents in Organic Synthesis,HROS). Recent titles in the HROS series include:

Reagents for Organocatalysis

Edited by Tomislav Rovis (2016)

Reagents for Heteroarene Functionalization

Edited by André B. Charette (2015)

Catalytic Oxidation Reagents

Edited by Philip L. Fuchs (2013)

Reagents for Silicon-Mediated Organic Synthesis

Edited by Philip L. Fuchs (2011)

Sulfur-Containing Reagents

Edited by Leo A. Paquette (2010)

Reagents for Radical and Radical Ion Chemistry

Edited by David Crich (2009)

Data mining of EROS user downloads guided by editorial adjudication has yielded the present collection of 52 often-used reagents that will facilitate the daily laboratory endeavor of every organic chemist. The collection contains oxidants (15), reductants (10), metal and organic catalysts (11), Brønsted and Lewis acids (8), and bases (6), to cite a fewgeneral mechanistic categories.

We hope that this handbook will prove to be an invaluable primary resource for both beginning graduate students and experienced Ph.D. researchers.

Philip L. Fuchs

Purdue University, West Lafayette, IN, USA

André B. Charette

Université de Montréal, Montréal, Québec, Canada

Tomislav Rovis

Colorado State University, Fort Collins, CO, USA

Jeffrey W. Bode

ETH Zürich, Switzerland

Short Note on InChIs and InChIKeys

The IUPACInternational Chemical Identifier (InChITM) and its compressed form, the InChIKey, are strings of letters representing organic chemical structures that allow for structure searching with a wide range of online search engines and databases such as Google and PubChem. While they are obviously an important development for online reference works, such as Encyclopedia of Reagents for Organic Synthesis (e-EROS), readers of this volume may be surprised to find printed InChI and InChIKey information for each of the reagents.

We introduced InChI and InChIKey to e-EROS in autumn 2009, including the strings in all HTML and PDF files. While we wanted to make sure that all users of e-EROS, the second print edition of EROS, and all derivative handbooks would find the same information, we appreciate that the strings will be of little use to the readers of the print editions, unless they treat them simply as reminders that e-EROS now offers the convenience of InChIs and InChIKeys, allowing the online users to make best use of their browsers and perform searches in a wide range of media.

If you would like to know more about InChIs and InChIKeys, please go to the e-EROS website: www.wileyonlinelibrary.com/ref/eros and click on the InChI and InChIKey link.

General Abbreviations

Ac

acetyl

acac

acetylacetonate

AIBN

2,2′-azobisisobutyronitrile

Ar

aryl

BBN

borabicyclo[3.3.1]nonane

BCME

dis(chloromethyl)ether

BHT

butylated hydroxytoluene (2,6-di-

t

-butyl-

p

-cresol)

BINAL-H

2,2′-dihydroxy-1,1′-binaphthyl-lithium aluminum hydride

BINAP

2,2′-bis(diphenylphosphino)-1,1′-binaphthyl

BINOL

1,1′-bi-2,2′-naphthol

bipy

2,2′-bipyridyl

BMS

borane–dimethyl sulfide

Bn

benzyl

Boc

t

-butoxycarbonyl

BOM

benzyloxymethyl

bp

boiling point

Bs

brosyl (4-bromobenzenesulfonyl)

BSA

N,O

-bis(trimethylsilyl)acetamide

Bu

n

-butyl

Bz

benzoyl

CAN

cerium(IV) ammonium nitrate

Cbz

benzyloxycarbonyl

CDI

N,N

′-carbonyldiimidazole

CHIRAPHOS

2,3-bis(diphenylphosphino)butane

Chx

=Cy

cod

cyclooctadiene

cot

cyclooctatetraene

Cp

cyclopentadienyl

CRA

complex reducing agent

CSA

10-camphorsulfonic acid

CSI

chlorosulfonyl isocyanate

Cy

cyclohexyl

d

density

DABCO

1,4-diazabicyclo[2.2.2]octane

DAST

N,N

′-diethylaminosulfur trifluoride

dba

dibenzylideneacetone

DBAD

di-

t

-butyl azodicarboxylate

DBN

1,5-diazabicyclo[4.3.0]non-5-ene

DBU

1,8-diazabicyclo[5.4.0]undec-7-ene

DCC

N,N

′-dicyclohexylcarbodiimide

DCME

dichloromethyl methyl ether

DDO

dimethyldioxirane

DDQ

2,3-dichloro-5,6-dicyano-1,4-benzoquinone

de

diastereomeric excess

DEAD

diethyl azodicarboxylate

DET

diethyl tartrate

DIBAL

diisobutylaluminum hydride

DIEA

=DIPEA

DIOP

2,3-

O

-isopropylidene-2,3-dihydroxy-1,4-bis-(diphenylphosphino)butane

DIPEA

diisopropylethylamine

diphos

DIPT

diisopropyl tartrate

DMA

dimethylacetamide

DMAD

dimethyl acetylenedicarboxylate

DMAP

4-(dimethylamino)pyridine

DME

1,2-dimethoxyethane

DMF

dimethylformamide

dmg

dimethylglyoximato

DMPU

N,N

′-dimethylpropyleneurea

DMS

dimethyl sulfide

DMSO

dimethyl sulfoxide

DMTSF

dimethyl(methylthio) sulfonium tetrafluoroborate

dppb

1,4-bis(diphenylphosphino)butane

dppe

1,2-bis(diphenylphosphino)ethane

dppf

1,1′-bis(diphenylphosphino)ferrocene

dppp

1,3-bis(diphenylphosphino)propane

DTBP

di-

t

-butyl peroxide

EDA

ethyl diazoacetate

EDC

1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide

EDCI

=EDC

ee

enantiomeric excess

EE

1-ethoxyethyl

Et

ethyl

ETSA

ethyl trimethylsilylacetate

EWG

electron withdrawing group

Fc

ferrocenyl

Fmoc

9-fluorenylmethoxycarbonyl

fp

flash point

Hex

n

-hexyl

HMDS

hexamethyldisilazane

HMPA

hexamethylphosphoric triamide

HOBt

l-hydroxybenzotriazole

HOBT

HOSu

N

-hydroxysuccinimide

Im

imidazole (imidazolyl)

Ipc

isopinocampheyl

IR

infrared

KHDMS

potassium hexamethyldisilazide

LAH

lithium aluminum hydride

LD

50

dose that is lethal to 50% of test subjects

LDA

lithium diisopropylamide

LDMAN

lithium 1-(dimethylamino)naphthalenide

LHMDS

=LiHMDS

LICA

lithium isopropylcyclohexylamide

LiHMDS

lithium hexamethyldisilazide

LiTMP

lithium 2,2,6,6-tetramethylpiperidide

LTMP

=LiTMP

LTA

lead tetraacetate

lut

lutidine

m

-CPBA

m

-chloroperbenzoic acid

MA

maleic anhydride

MAD

methylaluminum bis(2,6-di-

t

-butyl-4-methylphenoxide)

MAT

methylaluminum bis(2,4,6-tri-

t

-butylphenoxide)

Me

methyl

MEK

methyl ethyl ketone

MEM

(2-methoxyethoxy)methyl

MIC

methyl isocyanate

MMPP

magnesium monoperoxyphthalate

MOM

methoxymethyl

MoOPH

oxodiperoxomolybdenum(pyridine)-(hexamethylphosphoric triamide)

mp

melting point

MPM

=PMB

Ms

mesyl (methanesulfonyl)

MS

mass spectrometry; molecular sieves

MTBE

methyl

t

-butyl ether

MTM

methylthiomethyl

MVK

methyl vinyl ketone

n

refractive index

NaHDMS

sodium hexamethyldisilazide

Naph

naphthyl

NBA

N

-bromoacetamide

nbd

norbornadiene (bicyclo[2.2.1]hepta-2,5-diene)

NBS

N

-bromosuccinimide

NCS

N

-chlorosuccinimide

NIS

N

-iodosuccinimide

NMO

N

-methylmorpholine

N

-oxide

NMP

N

-methyl-2-pyrrolidinone

NMR

nuclear magnetic resonance

NORPHOS

bis(diphenylphosphino)bicyclo[2.2.1]-hept-5-ene

Np

PCC

pyridinium chlorochromate

PDC

pyridinium dichromate

Pent

n

-pentyl

Ph

phenyl

phen

1,10-phenanthroline

Phth

phthaloyl

Piv

pivaloyl

PMB

p

-methoxybenzyl

PMDTA

N,N,N′,N

′′

,N

′′

-pentamethyldiethylene-triamine

PPA

polyphosphoric acid

PPE

polyphosphate ester

PPTS

pyridinium

p

-toluenesulfonate

Pr

n

-propyl

PTC

phase transfer catalyst/catalysis

PTSA

p

-toluenesulfonic acid

py

pyridine

RAMP

(R)-1-amino-2-(methoxymethyl)pyrrolidine

rt

room temperature

salen

bis(salicylidene)ethylenediamine

SAMP

(

S

)-1-amino-2-(methoxymethyl)pyrrolidine

SET

single electron transfer

Sia

siamyl (3-methyl-2-butyl)

TASF

tris(diethylamino)sulfonium difluorotrimethylsilicate

TBAB

tetrabutylammonium bromide

TBAF

tetrabutylammonium fluoride

TBAD

TBAI

tetrabutylammonium iodide

TBAP

tetrabutylammonium perruthenate

TBDMS

t

-butyldimethylsilyl

TBDPS

t

-butyldiphenylsilyl

TBHP

t

-butyl hydroperoxide

TBS

=TBDMS

TCNE

tetracyanoethylene

TCNQ

7,7,8,8-tetracyanoquinodimethane

TEA

triethylamine

TEBA

triethylbenzylammonium chloride

TEBAC

TEMPO

2,2,6,6-tetramethylpiperidinoxyl

TES

triethylsilyl

Tf

triflyl (trifluoromethanesulfonyl)

TFA

trifluoroacetic acid

TFAA

trifluoroacetic anhydride

THF

tetrahydrofuran

THP

tetrahydropyran; tetrahydropyranyl

Thx

thexyl (2,3-dimethyl-2-butyl)

TIPS

triisopropylsilyl

TMANO

trimethylamine

N

-oxide

TMEDA

N,N,N

′,

N

′-tetramethylethylenediamine

TMG

1,1,3,3-tetramethylguanidine

TMS

trimethylsilyl

Tol

p

-tolyl

TPAP

tetrapropylammonium perruthenate

TBHP

t

-butyl hydroperoxide

TPP

tetraphenylporphyrin

Tr

trityl (triphenylmethyl)

Ts

tosyl (

p

-toluenesulfonyl)

TTN

thallium(III) nitrate

UHP

urea–hydrogen peroxide complex

Z

=Cbz

B

Bis(dibenzylideneacetone)palladium(0)

9-Borabicyclo[3.3.1]nonane Dimer

Boron Trifluoride Etherate

N

-Bromosuccinimide

n

-Butyllithium