Plant Breeding Reviews, Volume 38 E-Book

• Herausgeber: John Wiley & Sons
• Kategorie: Wissenschaft und neue Technologien
• Serie: Plant Breeding Reviews
• Sprache: Englisch

Seitenzahl: 612

Veröffentlichungsjahr: 2014

Beschreibung

Plant Breeding Reviews presents state-of-the-art reviews on plant genetics and the breeding of all types of crops by both traditional means and molecular methods. Many of the crops widely grown today stem from a very narrow genetic base; understanding and preserving crop genetic resources is vital to the security of food systems worldwide. The emphasis of the series is on methodology, a fundamental understanding of crop genetics, and applications to major crops. It is a serial title that appears in the form of one or two volumes per year.

Leseprobe

CONTENTS

Cover

Series Page

Title Page

Copyright

Contributors

Chapter 1: Daniel Zohary: Geneticist and Explorer of Plant Domestication

I. Early Days

II. Genetic Relationships Among Related Plant Species

III. Domestication of Crops and Fruit Trees

IV. The Scientific Approach and Methodology of Daniel Zohary

V. The Book

VI. Awards, Honors, and Recognition

VII. Personality

Literature Cited and Selected Publications of Daniel Zohary

Chapter 2: The Use of Association Genetics Approaches in Plant Breeding

Abbreviations

I. Introduction

II. Advantages of Association Mapping Approaches

III. Methods of Association Genetics

IV. Examples of Association Mapping

V. Software for Data Analysis

VI. Association Mapping Compared with Linkage Mapping

VII. Genome-Wide Selection and Genomic Selection

VIII. Outlook

Acknowledgments

Literature Cited

Chapter 3: Epigenetics Connects the Genome to Its Environment

I. Introduction

II. Historical Perspective and Conceptual Framework

III. Epigenetics

IV. Epigenetic Memory

V. Sex, Epigenetics, and the Genome

VI. Adaptation is a Form of Development

VII. Evolution: the Engine of Ideas

Acknowledgments

Literature Cited

Chapter 4: Peanut Improvement for Human Health

Abbreviations

I. Introduction

II. Genetic Variability for Nutritional Traits

III. Peanut Allergens

IV. Predicting Seed Quality and Allergens

V. Genetic and Molecular Bases of High Oleate Trait

VI. Sequencing the Peanut Genome and Implications in Breeding

VII. Transgene(S) to Produce Nutrient-Dense and Toxin- and Allergen-Free Peanuts

VIII. Breeding Opportunities

IX. Outlook

Acknowledgments

Literature Cited

Chapter 5: Rice Breeding in Latin America

Abbreviations and Acronyms

I. Introductory Remarks

II. The CIAT Rice Program

III. Advances in Population Improvement in Latin America and the Caribbean

IV. Genetics and Genomics Approaches to Improve Rice Breeding

V. Breeding for Resistance to Rice Pathogens

VI. Breeding for Adaptation to Abiotic Stresses

VII. Hybrid Rice Breeding

VIII. Rice Breeding Programs

IX. Perspectives and Future Directions

Literature Cited

Subject Index

Cumulative Subject Index

Cumulative Contributor Index

End User License Agreement

List of Tables

Table 2.1

Table 2.2

Table 2.3

Table 2.4

Table 2.5

Table 3.1

Table 5.1

Table 5.2

Table 5.3

Table 5.4

Table 5.5

Table 5.6

Table 5.7

List of Illustrations

Fig. 1.1

Fig. 1.2

Fig. 2.1

Fig. 2.2

Fig. 2.3

Fig. 5.1

Fig. 5.2

Fig. 5.3

Fig. 5.4

Guide

Cover

Table of Contents

Chapter 1

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Plant Breeding Reviews is sponsored by:

American Society for Horticultural Science

International Society for Horticultural Science

Society of American Foresters

National Council of Commercial Plant Breeders

Editorial Board, Volume 38

I. L. Goldman

C. H. Michler

Rodomiro Ortiz

Plant Breeding Reviews Volume 38

Edited by

Jules Janick

Purdue University

Cover design: John Wiley & Sons, Inc.

Cover illustration: Courtesy of the Series Editor

Copyright © 2014 by Wiley-Blackwell. All rights reserved

Published by John Wiley & Sons, Inc., Hoboken, New Jersey

Published simultaneously in Canada

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Library of Congress Cataloging-in-Publication Data:

ISBN 978-1-118-91683-4

ISSN 0730-2207

Contributors

María F. Álvarez, National University of Colombia – Bogotá, Bogotá, DC Colombia.

Mara Barbosa, Rio Grande do Sul State Rice Institute (IRGA), Cachoerinha, Rio Grande do Sul, Brazil.

Luis Berrío, Latin American Fund for Irrigated Rice (FLAR), Cali, Colombia.

Matthew W. Blair, Department of Agricultural and Environmental Sciences, Tennessee State University, Nashville, TN, USA.

Pedro Blanco, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Hans J. Bohnert, Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

Victoria Bonnecarrere, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Flavio Breseghello, Brazilian Enterprise for Agricultural Research (Embrapa Rice and Beans), Santo Antonio de Goiás, Brazil.

Ray A. Bressan, Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA.

Carlos Bernardo Bruzzone, Seeds El Potrero Farm, Jan, Per.

Ismael Camargo, Panamanian Institute for Agricultural Research (IDIAP), Panama City, Panama.

Gonzalo Carracelas, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Adriano Pereira de Castro, Brazilian Enterprise for Agricultural Research (Embrapa Rice and Beans), Santo Antonio de Goiás, Brazil.

Marc Chatel, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Viswanathan Chinnusamy, Division of Plant Physiology, Indian Agricultural Research Institute, New Delhi, India.

Jose Manoel Colombari Filho, Brazilian Enterprise for Agricultural Research (Embrapa Rice and Beans), Santo Antonio de Goiás, Brazil.

Fernando Correa-Victoria, Rice Tec Solutions, Alvin, TX, USA.

Edgar Corredor, Latin American Fund for Irrigated Rice (FLAR), Cali, Colombia.

Maribel Cruz, Latin American Fund for Irrigated Rice (FLAR), Cali, Colombia.

Gonzalo Zorrilla de San Martin, Latin American Fund for Irrigated Rice (FLAR), Cali, Colombia.

Beata Dedicova, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Jorge Duitama, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Sangam Dwivedi, Agricultural Science Center at Clovis, New Mexico State University, Clovis, NM, USA.

Gustavo Rodrigo Daltrozzo Funck, Rio Grande do Sul State Rice Institute (IRGA), Cachoerinha, Rio Grande do Sul, Brazil.

Silvia Garaycochea, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Cécile Grenier, AGAP Research Unit, Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), Montpellier, France; International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Manabu Ishitani, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Sergio Iraçu Gindri Lopes, Rio Grande do Sul State Rice Institute (IRGA), Cachoerinha, Rio Grande do Sul, Brazil.

Mathias Lorieux, DIADE Research Unit, Institut de Recherche pour le Développement (IRD), Montpellier, France; International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Albino Maggio, Department of Agricultural Science, University of Naples “Federico II”, Portici, Italy.

Soheila Maleki, USDA-ARS-SRRC, New Orleans, LA, USA.

Alfredo Marin, Argentinian Institute for Agricultural Research (INTA), Corrientes, Argentina.

César P. Martínez, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Sebastián Martínez, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Federico Molina, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Gloria Mosquera, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Teresa Mosquera, National University of Colombia – Bogotá, Bogotá, DC Colombia.

Rodomiro Ortiz, Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden.

Peggy Ozias-Akins, Department of Horticulture and Institute of Plant Breeding, Genetics and Genomics, University of Georgia, Tifton Campus, Tifton, GA, USA.

Orlando Peixoto, Brazilian Enterprise for Agricultural Research (Embrapa Rice and Beans), Santo Antonio de Goiás, Brazil.

Fernando Pérez de Vida, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Naveen Puppala, Agricultural Science Center at Clovis, New Mexico State University, Clovis, NM, USA.

Juan Rosas, National Agricultural Research Institute (INIA), Montevideo, Uruguay.

Michael Selvaraj, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Giora Simchen, Department of Genetics, Institute of Life Sciences, The Hebrew University of Jerusalem, Givat-Ram Campus, Jerusalem, Israel.

Joe Tohme, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Edgar A. Torres, International Center for Tropical Agriculture (CIAT), Cali, Colombia.

Michael J. Van Oosten, Department of Agricultural Science, University of Naples “Federico II”, Portici, Italy.

Jian-Kang Zhu, Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA.

1Daniel Zohary: Geneticist and Explorer of Plant Domestication

Giora Simchen

Department of Genetics Institute of Life Sciences The Hebrew University of Jerusalem Givat-Ram Campus Jerusalem, Israel

I. Early Days

II. Genetic Relationships Among Related Plant Species

III. Domestication of Crops and Fruit Trees

IV. The Scientific Approach and Methodology of Daniel Zohary

V. The Book

VI. Awards, Honors, and Recognition

VII. Personality

Literature Cited and Selected Publications of Daniel Zohary

Daniel Zohary is a botanist, geneticist, and cytogeneticist. He occupies the middle link in a dynasty of three professors of biology at the Hebrew University of Jerusalem. His father, Michael Zohary, was a renowned botanist who laid the foundation to comprehensive accounts and documentation of the Flora of Israel, whereas Daniel's son, Ehud Zohary, is a neurobiologist specializing in functional magnetic resonance imaging of the brain. Professor Zohary (known to all in Israel as Danny) is mostly recognized as an explorer of plant domestication and of the rise of agriculture and Neolithic settlements in the Fertile Crescent. His research and long career are marked by the employment of expertise from different scientific disciplines, such as botany, cytogenetics, population genetics, ecology, and archaeology, and the synthesis of findings obtained in these fields into a coherent evolutionary description of the rise of agriculture. Danny has published more than 100 peer-reviewed papers; unlike most of his colleagues, he was also able to summarize his life work in a comprehensive book on plant domestication, which was published in four successful editions (Zohary and Hopf 1988, 1993, 2000; Zohary et al. 2012).

I. Early Days

Danny Zohary was born in Jerusalem in 1926. As a teenager with a botanist father, Danny became familiar with the rich flora of the Holy Land and the Middle East and, as a student, already started to look into relationships between plant species, at the level of plant communities and their interaction with ecological factors, and over time, as evolutionary relationships. As an undergraduate student in Botany and Geology at the Hebrew University, Zohary's studies were interrupted in 1947–1949 by his active participation in the Israeli War of Independence; eventually he graduated in 1951. In 1952 he started his Ph.D. studies at the University of California, Berkeley, where his scientific interests took him in two parallel and equally productive directions. For his thesis work with G. Ledyard Stebbins, he investigated the relationships between diploid and tetraploid forms of Dactylis glomerata, a common Mediterranean grass. The Dactylis complex provided a good example of the success of autotetraploidy, as well as of diploid–tetraploid hybrids and gene flow in natural populations, and the prevalence of supernumerary chromosomes. These studies continued upon Zohary's return to Israel in 1956, and subsequently he became one of the world's experts on polyploidy (both auto- and allopolyploidy), following his mentor Stebbins. The second line of research Zohary undertook while being a graduate student at Berkeley was that of cytogenetics of meiosis in plants, under the guidance of Spencer W. Brown. The most important outcome of these studies was the proof that cytologically observed chiasmata in lily and in maize resulted from previously occurring crossing over events (Brown and Zohary 1955; Zohary 1955), in contrast to the alternative interpretation that chiasmata resulted from overlapping chromatids, which provided opportunities for crossover events (that subsequently did or did not take place).