Sample Preparation in LC-MS Bioanalysis -  - E-Book

Sample Preparation in LC-MS Bioanalysis E-Book

0,0
151,99 €

-100%
Sammeln Sie Punkte in unserem Gutscheinprogramm und kaufen Sie E-Books und Hörbücher mit bis zu 100% Rabatt.

Mehr erfahren.
Beschreibung

Revised and Expanded Handbook Provides Comprehensive Introduction and Complete Instruction for Sample Preparation in Vital Category of Bioanalysis Following in the footsteps of the previously published Handbook of LC-MS Bioanalysis, this book is a thorough and timely guide to all important sample preparation techniques used for quantitative Liquid Chromatography-Mass Spectrometry (LC-MS) bioanalysis of small and large molecules. LC-MS bioanalysis is a key element of pharmaceutical research and development, post-approval therapeutic drug monitoring, and many other studies used in human healthcare. While advances are continually being made in key aspects of LC-MS bioanalysis such as sensitivity and throughput, the value of research/study mentioned above is still heavily dependent on the availability of high-quality data, for which sample preparation plays the critical role. Thus, this text provides researchers in industry, academia, and regulatory agencies with detailed sample preparation techniques and step-by-step protocols on proper extraction of various analyte(s) of interest from biological samples for LC-MS quantification, in accordance with current health authority regulations and industry best practices. The three sections of the book with a total of 26 chapters cover topics that include: * Current basic sample preparation techniques (e.g., protein precipitation, liquid-liquid extraction, solid-phase extraction, salting-out assisted liquid-liquid extraction, ultracentrifugation and ultrafiltration, microsampling, sample extraction via electromembranes) * Sample preparation techniques for uncommon biological matrices (e.g., tissues, hair, skin, nails, bones, mononuclear cells, cerebrospinal fluid, aqueous humor) * Crucial aspects of LC-MS bioanalytical method development (e.g., pre-analytical considerations, derivation strategies, stability, non-specific binding) in addition to sample preparation techniques for challenging molecules (e.g., lipids, peptides, proteins, oligonucleotides, antibody-drug conjugates) Sample Preparation in LC-MS Bioanalysis will prove a practical and highly valuable addition to the reference shelves of scientists and related professionals in a variety of fields, including pharmaceutical and biomedical research, mass spectrometry, and analytical chemistry, as well as practitioners in clinical pharmacology, toxicology, and therapeutic drug monitoring.

Sie lesen das E-Book in den Legimi-Apps auf:

Android
iOS
von Legimi
zertifizierten E-Readern

Seitenzahl: 1121

Veröffentlichungsjahr: 2019

Bewertungen
0,0
0
0
0
0
0
Mehr Informationen
Mehr Informationen
Legimi prüft nicht, ob Rezensionen von Nutzern stammen, die den betreffenden Titel tatsächlich gekauft oder gelesen/gehört haben. Wir entfernen aber gefälschte Rezensionen.



Table of Contents

Cover

List of Contributors

Preface

List of Abbreviations

Part I: Current Sample Preparation Techniques in LC‐MS Bioanalysis

1 Basic Sample Preparation Techniques in LC‐MS Bioanalysis

1.1 Introduction

1.2 Physicochemical Properties of Drugs and Their Metabolites

1.3 Pre‐analytical Variables of Analyte(s) of Interest in Biological Matrix

1.4 Most Commonly Used Sample Preparation Methods in LC‐MS Bioanalysis

References

2 Online Extraction and Column Switching Techniques in LC‐MS Bioanalysis

2.1 Introduction

2.2 System Configuration

2.3 Commonly Used Online Extraction Techniques

2.4 Considerations for Utilizing Online Extraction Techniques

2.5 Summary

References

3 Equilibrium Dialysis, Ultracentrifugation, and Ultrafiltration in LC‐MS Bioanalysis

3.1 Introduction

3.2 Challenges and Considerations

3.3 Experimental Procedures

3.4 Summary

References

4 Phospholipid Depletion Techniques in LC‐MS Bioanalysis

4.1 Introduction

4.2 Impact of Phospholipids on Bioanalytical Methods

4.3 Investigating Matrix Effects Associated with Phospholipids

4.4 Minimizing Matrix Effects Associated with Phospholipids

4.5 Removing Phospholipids Prior to LC‐MS Analysis

4.6 Example Methods that Demonstrate Successful Phospholipid Removal

4.7 Conclusions

Acknowledgement

References

5 Salting‐out Assisted Liquid–Liquid Extraction (SALLE) in LC‐MS Bioanalysis

5.1 Introduction

5.2 Considerations in Developing a SALLE Method

5.3 Combination of SALLE with Other Extraction Techniques

5.4 Matrix Effect in SALLE

5.5 Miniaturization and Automatization

5.6 Summary

References

6 Supported Liquid Extraction (SLE) in LC‐MS Bioanalysis

6.1 Introduction

6.2 Principle of SLE

6.3 Advantages and Limitation of SLE in Quantitative LC‐MS Bioanalysis

6.4 Key Consideration in Developing Robust SLE‐LC‐MS Bioanalytical Method

6.5 Representative Protocols

6.6 Summary

References

7 Immunocapture in LC‐MS Bioanalysis

7.1 Introduction

7.2 Experimental Workflow and Optimization

7.3 Considerations on the Selection of Capture Reagents and the Limitations

7.4 Platforms for Immunocapture

7.5 Internal Standard Selection

7.6 Performance Evaluation

7.7 Applications and Representative Protocols

7.8 Validation Criteria and Regulatory Considerations

7.9 Summary

References

8 Microextraction Techniques in LC‐MS Bioanalysis

8.1 Introduction

8.2 Solid‐Phase Microextraction

8.3 Liquid‐Phase Microextraction

8.4 Summary

Acknowledgements

References

9 Microsampling Applications with LC‐MS Bioanalysis

9.1 Introduction

9.2 Plasma Microsampling Considerations

9.3 Dried Blood (Matrix) Spot (DBS) Considerations

9.4 Volumetric Absorptive Microsampling (VAMS)

9.5 Emerging Techniques

9.6 Summary

Acknowledgements

References

10 Nanomaterials for Sample Preparation in LC‐MS Bioanalysis

10.1 Introduction

10.2 Carbon Nanomaterials

10.3 Metallic NPs

10.4 Nanoporous Materials

10.5 Future Perspectives

Acknowledgements

References

11 Sample Preparation via Molecularly Imprinted Polymers (MIPs) in LC‐MS Bioanalysis

11.1 Introduction

11.2 Preparation of MIPs

11.3 MIPs for Sample Preparation in Bioanalysis

11.4 Fragment Imprinting

11.5 Summary

References

12 Stir‐bar Sorptive Extraction for Sample Preparation in LC‐MS Bioanalysis

12.1 Introduction

12.2 SBSE Principle

12.3 SBSE Steps

12.4 Derivatization

12.5 Coating Materials

12.6 Applications

12.7 Summary

References

13 Monolithic Spin Column Extraction in LC‐MS Bioanalysis

13.1 Introduction

13.2 History of Monoliths

13.3 The Use of Monolith as Sorbent in Solid‐Phase Extraction

13.4 Monolithic Spin Column for Sample Preparation

References

14 Aptamer‐based Sample Preparation in LC‐MS Bioanalysis

14.1 Introduction

14.2 Aptamer‐based Sample Preparation

14.3 Representative Protocols

14.4 Summary

Acknowledgements

References

15 Sample Extraction via Electromembrane in LC‐MS Bioanalysis

15.1 Introduction

15.2 Factors Affecting the Extraction Efficiency of EME

15.3 Recent Developments in EME

15.4 Bioanalytical Applications

15.5 Summary

References

Part II: Matrix‐specific Sample Preparation Techniques in LC‐MS Bioanalysis

16 Tissue Sample Preparation in LC‐MS Bioanalysis

16.1 Introduction

16.2 Selection of Homogenization Method

16.3 Common Protocols

16.4 Protocols for Special Tissue Sample Preparation

16.5 Challenges Associated with Tissue Homogenization

16.6 Summary

References

17 Sample Preparation for LC‐MS Bioanalysis of Peripheral Blood Mononuclear Cells

17.1 Introduction

17.2 Peripheral Blood Mononuclear Cells (PBMCs)

17.3 Sample Preparation Workflow for LC‐MS Bioanalysis of PBMC Samples

17.4 Representative Protocols

17.5 Summary

References

18 Sample Preparation for LC‐MS Bioanalysis of Urine, Cerebrospinal Fluid, Synovial Fluid, Sweat, Tears, and Aqueous Humor Samples

18.1 Introduction

18.2 Sample Preparation Methods for Urine

18.3 Sample Preparation Methods for Cerebrospinal Fluid

18.4 Sample Preparation Methods for Synovial Fluid

18.5 Sample Preparation Methods for Sweat

18.6 Sample Preparation Methods for Tears

18.7 Sample Preparation Methods for Aqueous Humor

18.8 Summary

References

19 Sample Preparation for LC‐MS Bioanalysis of Liposomal Samples

19.1 Introduction

19.2 Major Types of Sample Extraction Techniques for Liposomal Samples

19.3 Key Considerations in Sample Preparation for Liposomal Samples

19.4 Typical Protocols

19.5 Summary

References

Part III: Sample Preparation Techniques for LC‐MS Bioanalysis of Challenging Molecules

20 Key Pre‐analytical Considerations in LC‐MS Bioanalysis

20.1 Introduction

20.2 The Pre‐analytical Phase

20.3 Bioanalytical Evaluation‐planning

20.4 Common Pre‐analytical Issues in LC‐MS Bioanalysis

20.5 Summary

References

21 Derivatization in Sample Preparation for LC‐MS Bioanalysis

21.1 Introduction

21.2 Derivatization Strategies

21.3 Key Considerations for Derivatization

21.4 Application of Derivatization for Quantitative LC‐MS Bioanalysis

21.5 Summary

References

22 Sample Preparation for LC‐MS Bioanalysis of Lipids

22.1 Introduction

22.2 Sample Preparation for LC‐MS Bioanalysis of Lipids

22.3 Case Studies of LC‐MS Bioanalysis of Lipids

22.4 Summary

References

23 Sample Preparation for LC‐MS Bioanalysis of Peptides

23.1 Introduction

23.2 Properties of Peptides and Sample Pretreatment

23.3 Sample Preparation Strategies

23.4 Conclusions

Acknowledgements

References

24 Sample Preparation for LC‐MS Bioanalysis of Proteins

24.1 Introduction

24.2 Intact Versus Digested Protein Analysis

24.3 Enzymatic Digestion

24.4 Protein Depletion

24.5 Protein Extraction (Before Digestion)

24.6 Peptide Extraction (After Digestion)

24.7 Combined Protein and Peptide Extraction

24.8 Summary

References

25 Sample Preparation for LC‐MS Bioanalysis of Oligonucleotides

25.1 Introduction

25.2 Properties of Oligonucleotides and Associated Challenges in LC‐MS Bioanalysis

25.3 Classes of Oligonucleotides

25.4 Major Types of Sample Extraction Techniques

25.5 Key Considerations in Sample Preparation for LC‐MS Bioanalysis of Oligonucleotides

25.6 Representative Protocols

25.7 Summary

References

26 Sample Preparation for LC‐MS Bioanalysis of Antibody–Drug Conjugates

26.1 Introduction

26.2 Properties of ADC and Challenges for Sample Preparation

26.3 Sample Preparation Methods and Common Protocols

26.4 Future Perspective

Acknowledgements

References

Index

End User License Agreement

List of Tables

Chapter 1

Table 1.1 Commercially available protein precipitation plate/tubes.

Table 1.2 Commonly used organic solvents in LLE and their physicochemical...

Chapter 2

Table 2.1 Summary of extraction mechanisms and representative applica...

Chapter 3

Table 3.1 Advantages and disadvantages of (rapid) equilibrium dialysis (ED) for ...

Table 3.2 Advantages and disadvantages of ultrafiltration for sample preparation...

Table 3.3 Advantages and disadvantages of ultracentrifugation for sample prepara...

Table 3.4 Comparison of the advantages and disadvantages of three methods used f...

Chapter 4

Table 4.1 Summary of sample preparation strategies involved in monito...

Chapter 5

Table 5.1 Salting‐out assisted liquid–liquid extraction procedures for bioanalys...

Chapter 6

Table 6.1 Current applications involving SLE related to bioanalysis.

Table 6.2 Extraction recovery of 10 representative compounds under various extra...

Chapter 7

Table 7.1 Binding, washing, and elution buffers commonly used for immunocapture.

Table 7.2 Affinity of protein A and protein G to IgG subclass from different spe...

Table 7.3 A comparison of immunoglobulin binding proteins.

Chapter 8

Table 8.1 Bioanalytical methods for analysis of drugs and/or metaboli...

Table 8.2 Advantages, disadvantages, and trends of liquid‐phase microextr...

Chapter 9

Table 9.1 Effect of the different technique used to derive plasma for...

Table 9.2 Plasma concentrations of six over‐the‐counter drugs measure...

Table 9.3 Validation statistics for a GSK proprietary compound extrac...

Chapter 10

Table 10.1 A summary of characteristics of the different sample treatments using...

Table 10.2 Number of steps of the different sample treatments using nanomaterial...

Table 10.3 General advantages and disadvantages of the different types of nanoma...

Chapter 11

Table 11.1 Examples of MISPE in pharmaceutical analysis and bioanalys...

Chapter 12

Table 12.1 Examples of SBSE’s applications in bioanalysis.

Chapter 13

Table 13.1 Physicochemical properties of SPE columns.

Table 13.2 Physicochemical properties of commercial MonoSpin columns.

Table 13.3 Representative applications of MonoSpin® extraction in LC‐MS bioanaly...

Chapter 16

Table 16.1 Animal organ weight.

Table 16.2 Commonly used apparatus for tissue homogenization.

Table 16.3 Commonly used agents/enzymes for chemical or enzyme digest...

Table 16.4 Bead size and material selection for tissue interruption. ...

Table 16.5 Vial selection for beads beater tissue homogenization.

Table 16.6 Common parameters for beads beater homogenization (example...

Table 16.7 Homogenization of tissue for the analysis of labile analyt...

Chapter 18

Table 18.1 An example of urine sample preparation procedure using direct ...

Table 18.2 An example of urine sample preparation procedure using LLE....

Table 18.3 An example of urine sample preparation procedure using oasis M...

Table 18.4 An example of cerebrospinal fluid sample preparation procedure...

Table 18.5 An example of CSF sample preparation procedure using direct di...

Table 18.6 An example of synovial fluid sample preparation procedure usin...

Table 18.7 An example of synovial fluid sample preparation procedure usin...

Table 18.8 Sweat sample preparation procedure using direct dilution and f...

Table 18.9 Sweat sample preparation procedure using SPE with Micro SpinCo...

Table 18.10 Examples of tears sample preparation procedure using direct d...

Table 18.11 An example of tears sample preparation procedure using SPE....

Table 18.12 A typical aqueous humor sample preparation procedure using pr...

Table 18.13 An example of aqueous humor sample preparation procedure for ...

Chapter 20

Table 20.1 Proposed study design.

Table 20.2 Assay technical requirements.

Table 20.3 Whole blood sample collection/handling evaluation procedures...

Chapter 21

Table 21.1 Applications of various derivatization strategies.

Chapter 23

Table 23.1 Comparison of different sample preparation strategies for ...

List of Illustrations

Chapter 2

Figure 2.1 A schematic representation of online extraction LC‐MS/MS system with...

Figure 2.2 A schematic representation of online extraction LC‐MS/MS system with...

Chapter 3

Figure 3.1 Schematic representation of the equilibrium dialysis methodology.

Figure 3.2 Rapid equilibrium dialysis (RED) device. Each insert is comprised of...

Figure 3.3 Schematic representation of the ultrafiltration methodology.

Figure 3.4 Schematic representation of the ultracentrifugation methodology.

Chapter 4

Figure 4.1 Frameworks for common phospholipids found in membranes and plasma.

Figure 4.2 (a) (A) LC/MS/MS chromatograms of 250 μg ml

−1

phosphatidylchol...

Figure 4.3 In‐source CID spectra for GPChos at 90 V cone voltage on Quattro Mic...

Figure 4.4 TICs of MRM transitions for five phospholipids remaining in final ex...

Figure 4.5 The UHPLC‐MS/MS chromatograms for matrix (sturgeon) samples spiked w...

Figure 4.6 LC‐MS/MS separation of tamoxifen and its metabolites using steady‐st...

Chapter 5

Figure 5.1 Schematic diagram of the SALLE procedure.

Chapter 6

Figure 6.1 Procedure for supported liquid extraction.

Chapter 7

Figure 7.1 Summary of a typical immunocapture procedure.

Figure 7.2 Examples of different capture reagents.

Figure 7.3 Workflows of typical immunocapture formats. Protein (a), peptide (b)...

Figure 7.4 Evaluation of immunocapture recovery.

Chapter 8

Figure 8.1 Classification of the main microextraction techniques.

Figure 8.2 Main principles of solid‐phase microextraction (SPME) techniques: (a...

Figure 8.3 Main principles of liquid‐phase microextraction (LPME) techniques: (...

Chapter 9

Figure 9.1 Illustration of Drummond Capillary Device for plasma collection and ...

Figure 9.2 Statistical comparisons of air and positive displacement pipettes fo...

Figure 9.3 Illustration of MITRA Device for storage and collection of dried blo...

Figure 9.4 Illustration of MITRA Clamshell Device for storage and shipment of d...

Chapter 10

Figure 10.1 Basic principles of the main extraction techniques used with nanoma...

Figure 10.2 Extraction with MIPs: (a) preparation and (b) principle of MIPs for...

Chapter 11

Figure 11.1 Principle of molecular imprinting.

Figure 11.2 Single ion monitoring chromatograms of BPA, BPA‐

13

C

12

, and BPA‐d

16

...

Figure 11.3 Molecularly imprinted solid‐phase extraction (MISPE) procedure.

Figure 11.4 Experimental configuration of the online two‐step SPE‐LC procedure ...

Figure 11.5 Schematic of preparation of molecularly imprinted microSPE device.

Chapter 12

Figure 12.1 Diagram summarizing the most used methods for trace analysis of com...

Figure 12.2 The increase of β influences the theoretical efficiency of SBSE (PD...

Figure 12.3 Diagram summarizing the SBSE’s operating modes.

Figure 12.4 Illustration of derivatization modes. (a) In situ derivatization, (...

Figure 12.5 The structure of PDMS polymeric phase which has a glass transition ...

Chapter 13

Figure 13.1 Photograph of MonoSpin column (a), and electromicrograph of the dis...

Figure 13.2 General extraction procedure using MonoSpin columns.

Figure 13.3 Representative chromatograms of β‐blockers and calcium blockers obt...

Chapter 14

Figure 14.1 Typical schemes of the preparation of aptamer‐based affinity column...

Figure 14.2 Typical schemes of the preparation of aptamer‐immobilized magnetic ...

Figure 14.3 Scheme of the fabrication process and application of electrospun en...

Chapter 15

Figure 15.1 Typical electromembrane extraction setups for the extraction of aci...

Figure 15.2 Schematic illustration of on‐chip EME.

Figure 15.3 Schematic illustration for drop‐to‐drop EME.

Chapter 16

Figure 16.1 Response of test compound A in different tissues after FAF ultrason...

Figure 16.2 Average concentration of desipramine (a) and fluoxetine (b) in rat ...

Figure 16.3 Microscopic pictures of homogenate solution of mouse heart tissue. ...

Chapter 17

Figure 17.1 Illustration of blood separation for peripheral blood mononuclear c...

Figure 17.2 Illustration of blood separation for peripheral blood mononuclear c...

Chapter 18

Figure 18.1 Generic SPE procedures for biological sample preparation. MCX, mixe...

Figure 18.2 (a) Microduct

®

Sweat Collection System; (b) Microduct Sweat Co...

Figure 18.3 Schirmer’s tear test strips.

Chapter 19

Figure 19.1 Different fractions of the drug in biological samples after adminis...

Figure 19.2 Time course of released (nonencapsulated) doxorubicin (DXR) and lip...

Figure 19.3 Solid‐phase extraction procedure for measurement of encapsulated an...

Chapter 20

Figure 20.1 The work flow of pertinent planning in the pre‐analytical phase bef...

Chapter 21

Figure 21.1 General mechanism of derivatization reactions.

Figure 21.2 Chemical structures of typical derivatization reagents for detectio...

Figure 21.3 Metabolic pathway of prasugrel (Rehmel et al. 2006).

Figure 21.4 Derivatization reaction of the active metabolite of prasugrel (R‐13...

Figure 21.5 Step‐by‐step procedure of derivatization strategy for minodronic ac...

Chapter 22

Figure 22.1 Classes of lipids.

Figure 22.2 ECAPCI/MS/HRMS of 15‐HETE‐PFB. The low‐energy electrons generated f...

Figure 22.3 Typical LC‐ECAPCI/MS/HRMS chromatograms of HETEs as PFB derivatives...

Chapter 23

Figure 23.1 General overview of sample preparation (including sample pretreatme...

Chapter 24

Figure 24.1 Schematic representation of the different components of sample prep...

Figure 24.2 LC‐MS/MS chromatograms for the surrogate peptide of 2.0 ng ml

−1

...

Figure 24.3 Schematic representation of the removal of albumin from plasma by t...

Figure 24.4 Schematic representation of the immunocapture of PTH from human ser...

Figure 24.5 LC‐MS/MS chromatograms for the signature peptide of α1‐antichymotry...

Figure 24.6 Schematic representation of the combination of off‐line protein imm...

Chapter 25

Figure 25.1 The structure of oligonucleotide.

Figure 25.2 2′‐Endo and 3′‐endo conformations of sugar.

Figure 25.3 Schematic of phenol/chloroform LLE.

Figure 25.4 Oligonucleotide isolation by proteinase K digestion.

Figure 25.5 Solid‐phase extraction.

Figure 25.6 Ion‐exchange magnetic bead extraction.

Figure 25.7 Immunoaffinity capture approaches.

Chapter 26

Figure 26.1 Workflow depicting various sample preparation methods for quantitat...

Figure 26.2 Schematic illustration of sample preparation workflows for conjugat...

Figure 26.3 Workflow depicting sample preparation methods for conjugated antibo...

Figure 26.4 Workflow depicting sample preparation methods for total antibody qu...

Figure 26.5 Schematic illustration of sample preparation workflows for DAR anal...

Guide

Cover

Table of Contents

Begin Reading

Pages

ii

iii

iv

xvi

xvii

xviii

xix

xx

xxi

xxii

xxiii

xxiv

xxv

xxvi

xxvii

xxviii

xxix

1

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

31

32

33

34

35

36

37

38

39

40

41

42

43

44

45

46

47

48

49

50

51

52

53

54

55

56

57

58

59

60

61

62

63

64

65

66

67

68

69

70

71

72

73

74

75

76

77

78

79

80

81

82

83

84

85

86

87

88

89

90

91

92

93

94

95

96

97

98

99

100

101

102

103

104

105

106

107

108

109

110

111

112

113

114

115

116

117

118

119

120

121

122

123

124

125

126

127

128

129

130

131

132

133

134

135

136

137

138

139

140

141

142

143

144

145

146

147

148

149

150

151

152

153

154

155

156

157

158

159

160

161

162

163

164

165

166

167

168

169

170

171

172

173

174

175

176

177

178

179

180

181

182

183

184

185

186

187

188

189

190

191

192

193

194

195

196

197

198

199

201

203

204

205

206

207

208

209

210

211

212

213

214

215

216

217

218

219

220

221

222

223

224

225

226

227

228

229

230

231

232

233

234

235

236

237

238

239

240

241

242

243

244

245

246

247

248

249

251

252

253

254

255

256

257

258

259

260

261

262

263

264

265

266

267

268

269

270

271

272

273

274

275

276

277

278

279

280

281

282

283

284

285

286

287

288

289

290

291

292

293

294

295

296

297

298

299

300

301

302

303

304

305

306

307

308

309

310

311

312

313

314

315

316

317

318

319

320

321

322

323

324

325

326

327

328

329

330

331

332

333

334

335

336

337

338

339

340

341

342

343

344

345

346

347

348

349

350

351

352

353

354

355

WILEY SERIES ON PHARMACEUTICAL SCIENCE AND BIOTECHNOLOGY: PRACTICES, APPLICATIONS, AND METHODS

Series Editor:

Mike S. LeeMilestone Development Services

Mike S. Lee (ed.) • Integrated Strategies for Drug Discovery Using Mass Spectrometry

Birendra Pramanik, Mike S. Lee, and Guodong Chen (eds.) • Characterization of Impurities and Degradants Using Mass Spectrometry

Mike S. Lee and Mingshe Zhu (eds.) • Mass Spectrometry in Drug Metabolism and Disposition: Basic Principles and Applications

Mike S. Lee (ed.) • Mass Spectrometry Handbook

Wenkui Li and Mike S. Lee (eds.) • Dried Blood Spots – Applications and Techniques

Wenkui Li, Wenying Jian, and Yunlin Fu (eds.) • Sample Preparation in LC‐MS Bioanalysis

Sample Preparation in LC‐MS Bioanalysis

Edited by

Wenkui Li, Wenying Jian, and Yunlin Fu

This edition first published 2019© 2019 John Wiley & Sons, Inc.

All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, except as permitted by law. Advice on how to obtain permission to reuse material from this title is available at http://www.wiley.com/go/permissions.

The right of Wenkui Li, Wenying Jian, Yunlin Fu to be identified as the editors of the editorial material in this work has been asserted in accordance with law.

Registered OfficeJohn Wiley & Sons, Inc., 111 River Street, Hoboken, NJ 07030, USA

Editorial Office111 River Street, Hoboken, NJ 07030, USA

For details of our global editorial offices, customer services, and more information about Wiley products visit us at www.wiley.com.

Wiley also publishes its books in a variety of electronic formats and by print‐on‐demand. Some content that appears in standard print versions of this book may not be available in other formats.

Limit of Liability/Disclaimer of WarrantyIn view of ongoing research, equipment modifications, changes in governmental regulations, and the constant flow of information relating to the use of experimental reagents, equipment, and devices, the reader is urged to review and evaluate the information provided in the package insert or instructions for each chemical, piece of equipment, reagent, or device for, among other things, any changes in the instructions or indication of usage and for added warnings and precautions. While the publisher and authors have used their best efforts in preparing this work, they make no representations or warranties with respect to the accuracy or completeness of the contents of this work and specifically disclaim all warranties, including without limitation any implied warranties of merchantability or fitness for a particular purpose. No warranty may be created or extended by sales representatives, written sales materials or promotional statements for this work. The fact that an organization, website, or product is referred to in this work as a citation and/or potential source of further information does not mean that the publisher and authors endorse the information or services the organization, website, or product may provide or recommendations it may make. This work is sold with the understanding that the publisher is not engaged in rendering professional services. The advice and strategies contained herein may not be suitable for your situation. You should consult with a specialist where appropriate. Further, readers should be aware that websites listed in this work may have changed or disappeared between when this work was written and when it is read. Neither the publisher nor authors shall be liable for any loss of profit or any other commercial damages, including but not limited to special, incidental, consequential, or other damages.

Library of Congress Cataloging‐in‐Publication Data

Names: Li, Wenkui, 1964– editor. | Jian, Wenying, editor. | Fu, Yunlin, 1980– editor.Title: Sample preparation in LC‐MS bioanalysis / edited by Wenkui Li, Wenying Jian, Yunlin Fu.Other titles: Sample preparation in liquid chromatography‐mass spectrometry bioanalysisDescription: Hoboken, NJ : Wiley, [2019] | Series: Wiley series on pharmaceutical science and biotechnology | Includes bibliographical references. |Identifiers: LCCN 2018046969 (print) | LCCN 2018055539 (ebook) | ISBN 9781119274308 (Adobe PDF) | ISBN 9781119274322 (ePub) | ISBN 9781119274292 (hardcover)Subjects: LCSH: Liquid chromatography. | Mass spectrometry. | Biotechnology.Classification: LCC QD79.C454 (ebook) | LCC QD79.C454 S275 2019 (print) | DDC 543/.84–dc23LC record available at https://lccn.loc.gov/2018046969

Cover design: WileyCover image: © motorolka/Shutterstock

List of Contributors

Gilberto Alves, PhDCICS‐UBI – Health Sciences Research CentreUniversity of Beira InteriorCovilhãPortugal

Miguel Ángel Bello‐López, PhDDepartment of Analytical ChemistryUniversidad de SevillaSevillaSpain

Matthew Barfield, PhDResearch and DevelopmentGlaxoSmithKline PharmaceuticalsWareUK

Michael G. Bartlett, PhDDepartment of Pharmaceutical and Biomedical SciencesUniversity of GeorgiaAthens, GAUSA

Babak Basiri, PhDDepartment of Pharmaceutical and Biomedical SciencesUniversity of GeorgiaAthens, GAUSA

Ian A. Blair, PhDDepartment of Systems Pharmacology and Translational TherapeuticsPerelman School of MedicineUniversity of PennsylvaniaPhiladelphia, PAUSA

Chester L. Bowen, MSResearch and DevelopmentGlaxoSmithKline PharmaceuticalsCollegeville, PAUSA

Stacy Brown, PhDDepartment of Pharmaceutical SciencesGatton College of Pharmacy at East Tennessee State UniversityJohnson City, TNUSA

Pilar Campíns‐Falcó, PhDQuímica AnalíticaUniversitat de ValènciaBurjassotSpain

Jennifer Carmical, PharmDDepartment of Pharmaceutical SciencesGatton College of Pharmacy at East Tennessee State UniversityJohnson City, TNUSA

Zhongzhe Cheng, PhDSchool of PharmacyWeifang Medical UniversityWeifang, ShandongChina

Theo de Boer, PhDLC‐MS BioanalysisArdena Bioanalytical Laboratory (ABL)AssenThe Netherlands

Myriam Díaz‐Álvarez, MScDepartment of EnvironmentInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain

Fuyou Du, PhDDepartment of Applied ChemistryGuilin University of TechnologyGuilin, GuangxiChina

Amílcar Falcão, PhDLaboratory of PharmacologyFaculty of PharmacyUniversity of CoimbraCoimbraPortugal

Rut Fernández‐Torres, PhDDepartment of Analytical ChemistryUniversidad de SevillaSevillaSpain

Ana Fortuna, PhDLaboratory of PharmacologyFaculty of PharmacyUniversity of CoimbraCoimbraPortugal

Yunlin Fu, MSPharmacokinetic SciencesNovartis Institutes for BioMedical ResearchEast Hanover, NJUSA

Hong Gao, PhDDrug Metabolism & PharmacokineticsVertex PharmaceuticalsBoston, MAUSA

Rodrigo A. González‐Fuenzalida, PhDQuímica AnalíticaUniversitat de ValènciaBurjassotSpain

Rosa Herráez‐Hernández, PhDQuímica AnalíticaUniversitat de ValènciaBurjassotSpain

Bruce J. Hidy, BScR&D, PPDRichmond, VAUSA

Samuel Hofbauer, BSDepartment of Systems Pharmacology and Translational TherapeuticsUniversity of PennsylvaniaPhiladelphia, PAUSA

Mike (Qingtao) Huang, PhDClinical PharmacologyAkros Pharma Inc.Princeton, NJUSA

Rand G. Jenkins, BSc (retired)PPDMechanicsville, VAUSA

Allena J. Ji, PhD, NRCC, DABCCBiomarkers & Clinical Bioanalyses‐Boston, SanofiFramingham, MAUSA

Wenying Jian, PhDJanssen Research & Development, LLCSpring House, PAUSA

Hongliang Jiang, PhDTongji School of PharmacyHuazhong University of Science and TechnologyWuhan, HubeiChina

Neus Jornet‐Martinez, PhDQuímica AnalíticaUniversitat de ValènciaBurjassotSpain

Maria Kechagia, MScChemistry DepartmentAristotle University of ThessalonikiThessalonikiGreece

Jaeah Kim, PhDDepartment of Pharmaceutical and Biomedical SciencesUniversity of GeorgiaAthens, GAUSA

Maria Kissoudi, MScChemistry DepartmentAristotle University of ThessalonikiThessalonikiGreece

Fumin Li, PhDR&D, PPDMiddleton, WIUSA

Ning Li, PhDDepartment of Pharmaceutical AnalysisSchool of PharmacyShenyang Pharmaceutical UniversityShenyang, LiaoningChina

Wenkui Li, PhDPharmacokinetic SciencesNovartis Institutes for BioMedical ResearchEast Hanover, NJUSA

Ang Liu, PhDBioanalytical SciencesTranslational MedicineBristol‐Myers SquibbPrinceton, NJUSA

Rao N.V.S. Mamidi, PhD, DABTJanssen Research & Development, LLC.Raritan, NJUSA

Yan Mao, PhDDrug Metabolism & PharmacokineticsBoehringer Ingelheim Pharmaceuticals, Inc.Ridgefield, CTUSA

Antonio Martín‐Esteban, PhDDepartment of EnvironmentInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain

Henri Meijering, MScLC‐MS BioanalysisArdena Bioanalytical Laboratory (ABL)AssenThe Netherlands

Clementina Mesaros, PhDDepartment of Systems Pharmacology and Translational TherapeuticsUniversity of PennsylvaniaPhiladelphia, PAUSA

Akira Namera, PhDDepartment of Forensic MedicineGraduate School of Biomedical and Health SciencesHiroshima UniversityHiroshimaJapan

Ragu Ramanathan, PhDMedicine Design – ADME Sciences, Pfizer, IncGroton, CTUSA

María Ramos‐Payán, PhDDepartment of Analytical ChemistryUniversidad de SevillaSevillaSpain

Márcio Rodrigues, PhDCICS‐UBI – Health Sciences Research CentreUniversity of Beira InteriorCovilhãPortugal

Guihua Ruan, PhDDepartment of Applied ChemistryGuilin University of TechnologyGuilin, GuangxiChina

Takeshi Saito, PhDDepartment of Emergency and Critical Care MedicineTokai University School of MedicineIseharaJapan

Ashkan Salamatipour, BSDepartment of Systems Pharmacology and Translational TherapeuticsUniversity of PennsylvaniaPhiladelphia, PAUSA

Victoria F. Samanidou, PhDChemistry DepartmentAristotle University of ThessalonikiThessalonikiGreece

Nico van de Merbel, PhDPRA Health SciencesAssenThe Netherlands

Cong Wei, PhDDrug Metabolism & Pharmacokinetics, Vertex PharmaceuticalsBoston, MAUSA

Zongyu Wei, MSDepartment of Applied ChemistryGuilin University of TechnologyGuilin, GuangxiChina

Naidong Weng, PhDJanssen Research & Development, LLC.Spring House, PAUSA

John Williams, PhDDrug Metabolism & Pharmacokinetics Vertex PharmaceuticalsBoston, MAUSA

Xin Xiong, MSDepartment of PharmacyPeking University Third HospitalBeijingChina

Long Yuan, PhDBioanalytical SciencesBristol‐Myers SquibbPrinceton, NJUSA

Qiulian Zeng, MSDepartment of Applied ChemistryGuilin University of TechnologyGuilin, GuangxiChina

Jun Zhang, PhDDynamega LLCLake Forest, ILUSA

Dafang Zhong, PhDShanghai Institute of Materia MedicaChinese Academy of SciencesShanghaiChina

Yunting Zhu, PhDShanghai Institute of Materia MedicaChinese Academy of SciencesShanghaiChina

Preface

Sample preparation is a pivotal part of the integral LC‐MS bioanalysis, which has been heavily employed in the determination of drugs, drug metabolites, biomarkers, and other molecules of interest in various biological matrices (e.g. fluids or tissues) for decades. It has been playing an important role in a variety of human healthcare studies, ranging from drug discovery and development, therapeutic drug monitoring, to biomarker analysis. While highly sophisticated LC‐MS systems with better sensitivity and higher bioanalytical throughput have been continuously introduced, challenges that remain unchanged are the sample preparation prior to LC‐MS quantitation, for which data quality has direct impact on study conclusion.

The purpose of sample preparation is not only to make the analyte(s) of interest available in sample extracts at an appropriate concentration for MS detection but also to remove interfering matrix elements (e.g. phospholipids and salts) that, if not addressed properly, can alter MS response (e.g. signal suppression). In quantitative LC‐MS bioanalysis, clean sample extracts means: (i) better chromatography, (ii) lower limit of quantification, (iii) decreased assay variability (due to reduced matrix effects), (iv) less chance of false‐positive/negative results, (v) longer column lifetime, (vi) less instrument downtime, and (vii) minimized costs in manpower and equipment maintenance, etc. In practice, the best sample preparation strategies should always be considered, evaluated, and implemented whenever possible in developing a robust quantitative LC‐MS bioanalytical method.

As a companion for the previously published Handbook of LC‐MS Bioanalysis: Best Practice, Experimental Protocols and Regulations (Li, Zhang, and Tse, 2013, Wiley), the current book is to provide a timely and comprehensive update along with representative experimental protocols on all important sample preparation techniques for quantitative LC‐MS bioanalysis of small and large molecules. The 26 chapters of the book are divided into three parts. The first part of the book is focused on not only the basic but also the contemporary sample preparation techniques in LC‐MS bioanalysis. These include Protein Precipitation, Liquid–Liquid Extraction, and Solid‐Phase Extraction (Chapter 1), Online Extraction and Column Switching (Chapter 2), Equilibrium Dialysis, Ultracentrifugation, and Ultrafiltration (Chapter 3), Phospholipid Depletion (Chapter 4), Salting‐out Assisted Liquid–Liquid Extraction (SALLE) (Chapter 5), Supported Liquid Extraction (SLE) (Chapter 6), Immunocapture (Chapter 7), Microextraction (Chapter 8), Microsampling (Chapter 9), Extraction via Nanomaterials (Chapter 10), Extraction via Molecularly Imprinted Polymers (MIP) (Chapter 11), Stir‐bar Sorptive Extraction (Chapter 12), Monolithic Spin Column Extraction (Chapter 13), Aptamer‐based Sample Preparation (Chapter 14), and Sample Extraction via Electromembranes (Chapter 15).

In Part II, the current sample preparation techniques for LC‐MS bioanalysis of biological sample matrices other than common whole blood, plasma, or serum are discussed in detail along with experimental protocols. These matrices include but are not limited to Tissues, Hair, Nail, Skins, and Bones (Chapter 16), Peripheral Blood Mononuclear Cells (Chapter 17), Urine, Cerebrospinal Fluid, Synovial Fluid, Sweat, Tears, and Aqueous Humor (Chapter 18), and Liposomal Samples (Chapter 19).

Part III of the book is focused on sample preparation for LC‐MS bioanalysis of challenging molecules. This part starts with some Key Pre‐analytical Considerations in Quantitative LC‐MS Bioanalysis (Chapter 20), which is followed by Derivatization strategies for enhancing assay sensitivities in quantitative LC‐MS bioanalysis of molecules with poor ionization efficiency (Chapter 21). Sample preparation for quantitative LC‐MS bioanalysis of Lipids is captured in Chapter 22. In Chapter 23, detailed instructions and associated stepwise protocols are provided for LC‐MS bioanalysis of peptides. Expanding from peptides, detailed instructions of sample preparation for LC‐MS bioanalysis of Proteins, Oligonucleotides, and Antibody–drug Conjugates (ADCs) are captured in Chapters 24, 25, and 26, respectively.

Our purpose in committing to this project was to provide scientists in industry, academia, and regulatory agencies with all “practical tricks” in extracting various analyte(s) of interest from biological samples for LC‐MS quantification according to the current health authority regulations and industry practices. In this book we are confident that we have accomplished our goal. The book represents a major undertaking which would not have been possible without the contributions of all the authors and the support of their families. We also wish to thank the terrific editorial staff at John Wiley & Sons and give a special acknowledgment to Michael Leventhal, Managing Editor; Vishnu Narayanan, Project Editor; Beryl Mesiadhas, Project Manager; S. Grace Paulin Jeeva, Production Editor; and Robert Esposito, Associate Publisher, at John Wiley & Sons, for their premier support of this project.

Wenkui Li, PhDWenying Jian, PhDYunlin Fu, MS

List of Abbreviations

2D

two‐dimensional

3NPH

3‐nitrophenylhydrazine

5‐FU

5‐fluorouracil

5‐HETE

5‐hydroxyeicosatetraenoic acid

AA

acrylamide

AA

alendronic acid

AAC

α1‐antichymotrypsin

ACE

angiotensin I converting enzyme

ACE

automatic cartridge exchange

ACN

acetonitrile

ADA

anti‐drug antibody

ADC

antibody–drug conjugate

ADME

absorption, distribution, metabolism, and excretion

ADP

adenosine diphosphate

ADS

alkyl‐diol‐silica

AFA

adaptive focused acoustics

AFMC

aptamer‐functionalized monolithic column

AFMPC

aptamer‐functionalized material‐packed column

AFM

aptamer‐functionalized material

AFOTCC

aptamer‐functionalized open tubular capillary column

AFSC

aptamer‐functionalized spin column

AG

2‐arachidonoylglycerol

AGP

acid glycoprotein

AIBN

azo(bis) isobutyronitrile

AML

acute myeloid leukemia

AMP

adenosine monophosphate

APA

anti‐peptide antibody

APCI

atmospheric pressure chemical ionization

Apt‐AC

aptamer‐based affinity column

Apt‐AuNR

aptamer‐functionalized gold nanorod

Apt‐MM

aptamer‐functionalized magnetic material

Apt‐MNP

aptamer‐functionalized magnetic nanoparticle

Apt‐PANCMA

aptamer‐functionalized poly(acrylonitrile‐co‐maleic acid)

Apt‐PP‐fiber

aptamer‐based‐polypropylene fiber

Apt‐SA‐SPE

aptamer‐based surface affinity solid‐phase extraction

Apt‐SBSE

aptamer‐functionalized stir‐bar sorptive extraction

Apt‐SPE

aptamer‐based solid‐phase extraction

Apt‐SPME

aptamer‐based solid‐phase microextraction

ATP

adenosine triphosphate

AUC

area under the curve

AuNP

gold nanoparticle

BAL

bronchoalveolar lavage

BEAD

bead extraction and acid dissociation

BEH

bridged ethylene hybrid

BLQ

below limit of quantification

BNP

B‐type natriuretic peptide

BP

bisphosphonate

BP‐3

benzophenone‐3

BPA

bisphenol A

BSA

bovine serum albumin

BSL‐2

biosafety level‐2

BSTFA

N

,

O

‐bis(trimethylsilyl)trifluoroacetamide

CAD

collision‐activated dissociation

Cape

capecitabine

CCSHLLE

counter current salting‐out homogenous liquid–liquid extraction

CDA

cytidine deaminase

CDI

carbonyl diimidazole

CDR

complementarity‐determining region

CE

capillary electrophoresis

CE

cholestryl oleate

CHAPS

3‐([3‐cholamidopropyl]dimethylammonio)‐1‐propanesulfonate

CID

collision‐induced dissociation

CIP

chiral imprinted polymer

CNBF

4‐chloro‐3,5‐dinitrobenzotrifloride

CNS

central nervous system

CNT‐PDMS

carbon nanotube–poly(dimethylsiloxane)

CNT

carbon nanotube

COXs

cyclooxygenases

CPT

cell preparation tube

CSF

cerebrospinal fluid

CV

coefficient of variation

CZE‐C

4

D

capillary zone electrophoresis with capacitively coupled contactless conductivity detection

D

distribution ratio

D2EHPA

di‐(2‐ethylhexyl)phosphoric acid

DAD

diode array detection

DADPA

diaminodipropylamine

DAG

diacylglycerol (1,3‐dilinoleoyl‐rac‐glycerol)

DAR

drug‐to‐antibody ratio

DBS

dried blood spot

DCM

dichloromethane

DEHP

di‐(2‐ethylhexyl) phosphate

DEME

dynamic electromembrane extraction

DEX

dextromethorphan

DI

direct immersion

DIC

diclofenac

DIEA

diisopropylethylamine

DI‐SDME

direct immersion single‐drop microextraction

DLLE

dispersive liquid–liquid extraction

DLLME

dispersive liquid–liquid microextraction

DMBA

dimethylbutylamine

DMF

N,N

‐dimethylformamide

DMSO

dimethyl sulfoxide

DNS‐Cl

dansyl chloride

DOPA

dihydroxyphenylalanine

DOR

dextrorphan

DP IV

dipeptidyl peptidase IV

DPBS

Dulbecco’s phosphate‐buffered saline

DPX

disposable pipette extraction

DSEA

dansyl sulfonamide ethyl amine

D‐SPE

dispersive solid‐phase extraction

DTT

dithiothreitol

DVB

divinylbencene

DXR

doxorubicin

EA

ethyl acetate

EBF

European Bioanalytical Forum

ECAPCI

electro capture atmospheric pressure chemical ionization

ED

equilibrium dialysis

EDC·HCl

1‐ethyl‐3‐(3‐dimethylaminopropyl) carbodiimide hydrochloride

EDC/NHS

N

‐(3‐dimethylamnopropyl)‐

N

‐ethylcarbodiimide hydrochloride/

N

‐hydroxysuccinimide

EDTA

ethylenediaminetetraacetic acid

EG

ethylene glycol

EGDMA

ethylene glycol dimethacrylate

EHS

ethylhexyl salicylate

ELISA

enzyme‐linked immunosorbent assay

EME

electromembrane extraction

EME‐DLLME

electromembrane extraction dispersive liquid–liquid microextraction

EME‐LDS‐USAEME

electromembrane extraction low‐density solvent‐based ultrasound‐assisted emulsification electromembrane microextraction

EM‐SPME

electromembrane‐surrounded solid‐phase microextraction

ENB

1‐ethyl‐2‐nitrobenezene

EPR

enhanced permeation and retention

ESI

electrospray ionization

EtOH

ethanol

FA

fatty acid

FA

formic acid

FBAL

α‐fluoro‐β‐alanine

FBS

fetal bovine serum

Fc

fragment crystallizable region/constant region

FcRn

human neonatal Fc receptor

FDA

Food and Drug Administration

FLD

fluorescence detection

FLM

free liquid membrane

Fmoc‐Cl

9‐florenylmethoxycarbonyl chloride

FNME

fiber‐packed needle microextraction

GAC

green analytical chemistry

GC

gas chromatography

GC‐FID

gas chromatography–flame ionization detection

GC‐MS

gas chromatography–mass spectrometry

GIP

glucose‐dependent insulintropic peptide

GLP‐1

glucagon‐like peptide‐1

GMA

glycidylmethacrylate

GnRH

gonadotropin‐releasing hormone

GPChos

glycerophosphatidylcholines

GPCs

glycerophosphatidylcholines

GPE

gum‐phase extraction

GPI

glycosylphosphatidylinositol

HETP

height equivalent to a theoretical plate

HFIP

1,1,1,3,3,3‐hexafluoro‐isopropanol

HF‐LPME

hollow fiber liquid‐phase microextraction

HILIC

hydrophilic interaction liquid chromatography

HIV

human immunodeficiency virus

HMS

homosalate

HND‐G

high nitrogen‐doped graphene

HNE

human neutrophil elastase

HPIM

homemade polymer inclusion membrane

HPLC

high‐performance liquid chromatography

HRMS

high‐resolution mass spectrometry

HS

headspace

HSSBSE

headspace stir‐bar sorptive extraction

HS‐SDME

headspace single‐drop microextraction

HTLC

high‐turbulence liquid chromatography

IACUC

Institutional Animal Care and Use Committee

IAE

immunoaffinity extraction

IAM

iodoacetamide

IA‐SPE

immunoaffinity solid‐phase extraction

IC

immunocapture

iCAT

isotope‐coded affinity tag

ICP‐MS

inductively coupled plasma mass spectrometry

ID

internal diameter

IGF

insulin‐like growth factor

IgG

immunoglobulin G

IL‐21

interleukin‐21

IMAC

immobilized metal ion affinity chromatography

IPA

isopropanol

IS

internal standard

ISET

integrated selective enrichment target

IS‐MRM

in‐source multiple reaction monitoring

ISR

incurred sample reanalysis

ISTD

internal standard

ITMS

ion trap mass spectrometry

iTRAQ

isobaric tags for relative and absolute quantification

IT‐SPME

in‐tube solid‐phase microextraction

IUPAC

International Union of Pure and Applied Chemistry

IV

intravenous

IVT

in vitro

transcription

IX‐SPE

ion exchange‐solid‐phase extraction

Kb/p

blood to plasma ratio

Ke/p

red blood cell partition coefficient

LBA

ligand‐binding assay

LC

liquid chromatography

LC‐MS

liquid chromatography–mass spectrometry

LC‐MS/MS

liquid chromatography–tandem mass spectrometry

LC‐UV/FL

liquid chromatography with ultraviolet/fluorescence detection

LD

liquid desorption

LGPChos

lysoglycerophosphocholines

LLE

liquid–liquid extraction

LLOQ

lower limit of quantification

LOXs

lipoxygenases

LPCs

lyso‐phosphatidylcholines

LPME

liquid‐phase microextraction

LSC

liquid scintillation counting

MA

methyacrylate, methyl acrylate

MA

minodronic acid

MAA

methacrylamide

MAA

methacrylic acid

mAb

monoclonal antibody

MADB

poly(methacrylic acid‐3‐sulfopropyl ester potassium salt‐co‐divinylbenzene)

MAG

monoacylglycerol (1‐stearyl‐rac‐l glycerol)

MALDI

matrix‐assisted laser desorption ionization

MAX

mixed‐mode anion exchange

MCV

mean cell volume

MCX

mixed‐mode cation exchange

MDA‐LDL

malondialdehyde‐modified low‐density lipoprotein

MDMA

3,4‐methylenedioxy‐

N‐

methylamphetamine

MDS

myelodysplastic syndromes

MeOH

methanol

MEPS

microextraction by packed sorbent

MF

matrix factor

MI‐MSPE

molecularly imprinted micro‐solid‐phase extraction

MIPs

molecularly imprinted polymers

MISPE

molecularly imprinted solid‐phase extraction

MISPE‐DPE

molecularly imprinted solid‐phase extraction with differential pulsed elution

MISPE‐PE

molecularly imprinted solid‐phase extraction with pulsed elution

MIST

metabolites in safety testing

MIT

molecular imprinting technology

MLLE

micro‐liquid–liquid extraction

MMA

methylmalonic acid

MMAE

monomethyl auristatin E

MMST

monolithic molecularly imprinted polymer sol–gel packed tip

MNP

magnetic nanoparticle

MPB

2‐bromo‐3′‐methoxyacetophenone

mPGES‐1

microsomal prostaglandin E synthase‐1

MPS

3‐methacryloyloxypropyltrimethoxysilane

MRM

multiple reaction monitoring

mRNA

messenger RNA

MS

mass spectrometry

MS/MS

tandem mass spectrometry

MSP

magnetic supraparticle

MSPD

matrix solid‐phase dispersion

MSPE

magnetic solid‐phase extraction

MTBE

methyl

tert

‐butyl ether

MTBSTFA

N

‐(tert‐butyldimethylsilyl)‐

N

‐methyl trifluoroacetamide

MW

molecular weights

MWCNT

multiwall carbon nanotube

MWCO

molecular weight cutoff

NAaPs

nucleic acid associated proteins

NAb

neutralizing antibody

NA

nucleic acid

NCEs

new chemical entities

NEM

N

‐ethylmaleimide

NHS

N

‐hydroxysuccinimide

NK

natural killer

NPOE

2‐nitrophenyloctyl ether

NPPE

2‐nitrophenyl pentyl ether

NPs

nanoparticles

NSB

nonspecific binding

NSE

neuron‐specific enolase

NTproBNP

N‐terminal pro‐B‐natriuretic peptide

OC

octocrylene

OD‐PABA

ethylhexyl dimethyl

p

‐aminobenzoate

ODS

octadecyl

OH‐PAH

monohydroxylated polycyclic aromatic hydrocarbon

OH‐PDMS

hydroxyl polydimethylsiloxane

OTT

open tubular trapping

OxLDL

oxidized low‐density lipoprotein

P

partition ratio

PA

phosphatidic acid

PA

polyacrylate

PA‐EG

poly(methyl methacrylate/ethyleneglycoldimethacrylate)

Pa‐EME

parallel electromembrane extraction

PALME

parallel artificial liquid membrane extraction

PANCMA

poly(acrylonitrile‐co‐maleic acid)

PAR

peak area ratio

PBD

pyrrolobenzodiazepine

PBMC

peripheral blood mononuclear cell

PBS

phosphate‐buffered saline

PBST

phosphate‐buffered saline with Tween‐20

PCA

perchloric acid

PCB

polychlorinated biphenyl

PCI

protein C inhibitor

PCs

phosphatidylcholines

PD

pharmacodynamics

PD

phospholipid depletion

PDMS

polydimethylsiloxane

PE

phosphoethanolamine

PEG

polyethylene glycol

PEME

pulsed electromembrane extraction

PEO

polyethylene oxide

PE

phosphatidylethanolamine

PFB

pentafluorobenzyl

PG

phosphatidylglycerol

PGs

prostaglandins

PHMB

4‐(hydroxymercuri)benzoate

PI

phosphatidylinositol

PK

pharmacokinetics

PK/PD

pharmacokinetic/pharmacodynamic

PK/TK

pharmacokinetic/toxicokinetic

PKU

phenylketonuria

PLs

phospholipids

PMMA

pentamethylated minodronic acid

PMMA

poly(methyl methacrylate)

PMSF

phenylmethylsulfonyl fluoride

poly(GMA‐co‐EDMA)

poly(glycidyl methacrylate‐coethylene dimethacrylate)

PP

polypropylene

PPB

plasma protein binding

PPESK

poly(phthalazine ether sulfone ketone)

PP‐fiber

porous polymer‐coated fiber

PPT

protein precipitation

PPY

polypyrrole

ProGRP

pro‐gastrin releasing peptide

PS

phosphatidylserine

PTFE

polytetrafluorethylene

PTV

programmable temperature vaporize

PU

polyurethane foams

PUFA

polyunsaturated fatty acids

QC

quality control

QTOF

quadropole time‐of‐flight

QuEChERS

quick, easy, cheap, effective, rugged, safe extraction method

RA

risedronic acid

RAM

restricted access material

RBC

red blood cell

REC

extraction recovery

RED

rapid equilibrium dialysis

rhTRAIL

recombinant human tumor necrosis factor‐related apoptosis‐inducing ligand

RISC

RNA‐induced silencing complex

ROS

reactive oxygen species

RP

reversed phase

RP‐SPE

reversed‐phase solid‐phase extraction

RPV

rilpivirine

SA‐EME

surfactant‐assisted electromembrane extraction

SALLE

salting‐out assisted liquid–liquid extraction

SAX

strong anion exchange

SBSE

stir‐bar sorptive extraction

SCAP

sample card and prep

SCIT

(+)‐(

S

)‐citalopram

SCX

strong cation exchange

SDCIT

(+)‐(

S

)‐desmethylcitalopram

SDDCIT

(+)‐(

S

)‐didesmethylcitalopram

SDF

stromal cell‐derived factor

SDME

single‐drop microextraction

SDS‐PAGE

sodium dodecyl sulphate–polyacrylamide gel electrophoresis

SDU

solvent delivery unit

sEGFR

soluble epidermal growth factor receptor

SELEX

systematic evolution of ligands by exponential enrichment

SF

synovial fluid

SHBG

sex hormone‐binding globulin

SIL

stable isotope labeled

SIL‐IS

stable isotopically labeled internal standard

SiNWA

silicon nanowire array

SISCAPA

stable isotope standards and capture by anti‐peptide antibodies

SLE

supported liquid extraction

SLM

supported liquid membrane

SM

sphingomyelin

SPDE

solid‐phase dynamic extraction

SPE

solid‐phase extraction

SPME

solid‐phase microextraction

SRM

selected reaction monitoring

SRM

single reaction monitoring

SSH

steroid sex hormone

SWCNT

single‐wall carbon nanotube

TAG

triacylglycerol (1,3‐dipalmitoyl,2oleoyl‐glycerol)

TAHS

p‐N,N,N

‐trimethylammonioanilyl

N′

‐hydroxysuccinimidyl carbamate iodide

TBS

tris‐buffered saline

TCA

trichloroacetic acid

TCAFMF

thermally controlled aptamer‐functionalized microfluid

TCEP

tris(2‐carboxyethyl)phosphine

TD

thermal desorption

TD

toxicodynamic

TDU

thermal desorption unit

TEA

triethylamine

TEHP

tris(2‐ethylhexyl)phosphate

TEPA

tetraethylenepentamine

TFA

trifluoroacetic acid

TFC

turbulent flow chromatography

TFME

thin‐film microextraction

Tg

thyroglobulin

THCA

11‐nor‐9‐carboxy‐Δ

9

‐tetrahydrocannabinol

THF

tetrahydrofuran

THU

tetrahydrouridine

Ti

titanium

TK

toxicokinetic

TK/TD

toxicokinetic/toxicodynamic

TLC

thin layer chromatography

TMMA

tetramethyl minodronic acid

TMS‐DAM

trimethylsilyldiazomethane

TNFα

tumor necrosis factor alpha

TRAIL

tumor necrosis factor‐related apoptosis‐inducing ligand

Tris

tri(hydroxymethyl)aminomethane

TSV‐DEME

two‐step voltage dual electromembrane extraction

TXB

2

thromboxane B

2

Tyr

tyrosine

UC

ultracentrifugation

UF

ultrafiltration

UHPLC

ultra‐high‐performance liquid chromatography

ULOQ

upper limit of quantitation

UPLC

ultra performance liquid chromatography

UV

ultraviolet

VAMS

volumetric absorptive microsampling

VIDB

vinylimidazole–divinylbenzene

VPy

vinylpyridine

WAX

weak anion exchange

WBC

white blood cell

WCX

weak cation exchange

Zr

zirconium

β‐NGF

beta‐nerve growth factor

γ‐MPTS

γ‐mercaptopropyltrimethoxysilane

μ‐EME

micro‐electromembrane extraction

μ‐SPE

micro‐SPE

Part ICurrent Sample Preparation Techniques in LC‐MS Bioanalysis