Demystifying COVID-19: Understanding the Disease, Its Diagnosis. and Treatment - Ozgur Karcioglu - E-Book

Demystifying COVID-19: Understanding the Disease, Its Diagnosis. and Treatment E-Book

Ozgur Karcioglu

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The management of COVID-19 is challenging due to the lack of clear information about the Sars-Cov2 and recommendations for specific treatment regimens. The scale of the pandemic has also exacerbated the situation, with health care systems under stress from the high volume of COVID-19 patients.In Demystifying COVID-19: Understanding the Disease, Its Diagnosis, and Treatment, medical experts explain many aspects about the COVID-19 pandemic, including guidelines to minimize risk of infection, diagnostic methods, treatment, real scenarios in the course of the disease and issues that need attention in specific patient groups. The book equips both general readers and healthcare professionals with key information required to understand COVID-19 and navigate a situation typical to a pandemic. Public health officials who wish to mobilize awareness campaigns for the benefit of the general public can also find value in the comprehensive information presented in this reference. Key Features:- 16 chapters covering several aspects of COVID-19 including risk management, clinical diagnosis and treatment, public health issues and vaccines- Unique Q&A format which presents easy-to-understand information for all types of readers- Presents basic clinical information- Provides information for the management of COVID-19 in special patients (patients with comorbidities, the elderly, newborns, children, and pregnant women)- Bibliographic References for further reading

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Veröffentlichungsjahr: 2021

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Table of Contents
BENTHAM SCIENCE PUBLISHERS LTD.
End User License Agreement (for non-institutional, personal use)
Usage Rules:
Disclaimer:
Limitation of Liability:
General:
PREFACE
CONSENT FOR PUBLICATION
CONFLICT OF INTEREST
ACKNOWLEDGEMENTS
How Can a Country Defeat COVID-19? Value of R0, Rt and Re
Abstract
What are R0, Rt, and Re?
Incubation period
Principles of surveillance and struggle with the pandemic: How countries differ from each other?
How effective is home stay, social / individual isolation in preventing the spread of COVID-19?
Belgium has a very different case situation
Herd immunity and the 'second wave' problem: Myth or truth?
Is the ‘ordinary citizen’ also guilty? Which mistakes did they do in the pandemic and ‘normalization’?
How does this disease end?
The Spanish flu experiences of 1918: Does history light our way?
Why is It Called ‘Spanish Flu’?
Is It Different From Other Flu Syndromes?
What happened in the USA?
Mass Graves Were Opened in The Usa in September 1918 Due To Massive Death Toll
REFERENCES
Comorbid Diseases and COVID-19: COPD, Smoking, Obesity, Diabetes, Cancer, and Kidney Failure
Abstract
The Relationship between COVID-19 Fatality Rate and Comorbidities
Pulmonary Diseases and COVID-19
Could COVID-19 Infection also Cause COPD-AA?
Are Patients with COPD or Asthma at High Risk for Contracting COVID-19?
Are Patients with COPD at High Risk for Severe COVID-19 and Death?
How are The Follow-up and Treatment of COPD and COPD-AA Cases During The Pandemics?
Are Systemic Corticosteroids (CST) Used in COPD-AA During Pandemic?
Are There Any Changes For Asthma Patients?
How is an Asthma Attack Treated While Infected with COVID-19?
Is the Use of Nebulizers Recommended in The Treatment of Asthma/COPD During The COVID-19 Outbreak?
Does Smoking and COPD Development Alter Expression of ACE2 Receptors?
Does Smoking Affect Clinical Course?
Is Smoking also Effective in Influenza?
Is COVID-19 More Severe in Smokers?
What are The Key Findings of Systematic Reviews and Meta-analyzes with High Level of Evidence?
What is “Smoker’s Paradox” (SP), are There any Justifications?
Obesity and COVID-19
Numerical Data showing the Relationship between Obesity and COVID-19
Diabetes and COVID-19
In a Diabetic Patient Hospitalized in The COVID-19 Process, There will be 5 Essential Steps of Management
Cancer and COVID-19
Why are Cancer Patients More Disadvantaged in Terms of COVID-19?
Are There any More Special Risk Groups among People with Cancer?
Can Cancer be Diagnosed During The Pandemic Period, and can Interventions be Performed as Before?
Are there Specific Difficulties in Diagnostic Interventions for COVID-19?
Are There Specific Difficulties for Cancer Patients Regarding Care and Treatment?
Is there any Difference Regarding the Psychological Conditions of Cancer Patients in this Period?
The Risk of Reactive or Major Depression will be further Increased
What are the General Messages?
Renal Failure (RF), Acute Kidney Injury (AKI) And COVID-19
Lung-Kidney Axis (LKA): A New Pathway for Kidney Damage?
CONCLUSION
REFERENCES
Risks and Losses of Healthcare Workers in the Pandemic Era
Abstract
Phenomena proven to increase the risk of COVID-19 transmission in HCW
Is COVID-19 Risky for HCW?
How much Risk COVID-19 Impose on HCW?
Headlines from various countries
The situation in Turkey
Situations Increasing the Risk of Infection to HCW
Findings
Precautions and Measures
Personal Protective Equipment
Sequence of Control Measures
Infection Protection and Control Measures
Psychosocial Problems in HCW During The Pandemics
What kind of Interventions can be Pursued to Support The Resilience and Mental Health of Frontline HCW During The Pandemic?
Is there any good news to convey?
Conclusion
REFERENCES
What Kind of Disease is this? Signs and Symptoms, Predictors of Clinical Course and Management
Abstract
Do Patients Who Are Diagnosed Necessarily Have Symptoms?
Asymptomatic And Symptomatic… is There A 3rd Way?
Can A Mild-looking Patient Worsen Quickly?
Which Markers Can We Use To Predict Clinical Worsening?
Radiological Criteria
Typical Case
How Are Covid And Cough Related?
Cough In Terms of Contagiousness
Pharmacological Methods To Relieve Cough
Gastrointestinal Complaints And Findings In The Course of Covid-19
Corona Facts: Which Is Correct?
Conclusion
REFERENCES
Diagnosis of COVID-19: Which Tests To Do? Laboratory and Radiological Adjuncts To Recognition
Abstract
Laboratory Tests
Cytokines and Related Findings
Laboratory Values Can Also Highlight The Stages of The Disease
Do Antibody Tests Give Accurate Results In The Early Period After Infection?
Chest Imaging - Radiological Examinations
Which Should We Choose? X-ray, CT, USG, or MR?
Case Example and Time Course of the Disease
Conclusion
References
Cardiovascular Disease, Myocarditis, Infarctions, And COVID-19
Abstract
Key Findings From Different Database Studies
Are ethnic differences important for COVID-19?
HT and COVID-19
Myocardial injury severity and mortality
How Much Myocardial Damage Occurs in COVID-19?
In Whom Does Myocardial Damage Occur and How Do We Identify It?
Any Pathological Finding?
Global View of Myocardial Infarction (STEMI / NSTEMI) After COVID-19
Did The Pandemic Affect Heart Attacks?
What Should Be Done?
COVID-19 and Myocardial Damage, Myocarditis
Fulminant Myocarditis (FM)
Symptoms and Signs in Myocarditis
Ancillary Studies
Thrombotic Events, Bleeding, Coagulopathies, and COVID-19
Cytokine-Mediated Alveolar Inflammation Triggers the Formation Of Microthrombi In The Pulmonary Vasculature, Which Can Culminate Into Thrombi Or Embolism In Severe Cases
Increased D-dimer, PT, aPTT, CRP, ESR, and PCT Levels Noted on Presentation were Found To Be Associated With Death In Covid-19 Patients (Al-Samkari et al., 2020)
Additional Note: Mean Values Of Fibrinogen, Ferritin, Pct Are Also Higher In Patients With Thrombosis
Pathological Mechanism
Conclusion
References
Gastrointestinal Signs and Symptoms in the Course of COVID-19
Abstract
INTRODUCTION
How Important is GIS in The Pathophysiology of The Virus?
Which GI Findings Do We Mention About?
Children and GI Complaints
Inflammatory Bowel Diseases (IBD) and COVID-19
Hepatic Damage and COVID-19
CONCLUSION
References
Is Our Psychology Affected By the Pandemic? How?
Abstract
What are Stress Reactions? What can we do?
Why are we Stressed During this Period?
Adverse emotional, physical, or Cognitive Responses that Arise in Response to the Effects of the COVID-19 Pandemic Include
COVID-19 and our Psychology: What do the Researchers Say?
COVID-19 and Dealing with Stress
Coping with Stress
Awareness of Emotions
Social Relations
Try not to Disturb your Routine and Sleep Patterns
Do Hobbies Work?
What Does Physical Activity Bring us?
Bias and Stigmatization
Conclusion
References
COVID-19 and Our Brain: What's New?
Abstract
Introduction
How can Covid-19 affect the brain and nervous system?
What kind of damage does COVID-19 cause in the brain?
What kinds of neurological signs and symptoms do COVID-19 can be evident?
Does it have long-term effects on the CNS?
Effects of COVID-19 on people with neurological disorders
Does COVID-19 increase the risk of stroke?
Many patients mention loss of smell / taste
Is there an association between anosmia and respiratory failure?
Does COVID-19 trigger brain tissue inflammation (encephalitis)?
What are the treatment methods after COVID-19 inflicts the CNS?
CONCLUSION
References
COVID-19 Pneumonia and ARDS: The Real Killer?
Abstract
Definition
Clinical Features
Diagnosis
The most common CT findings on presentation (Adapted from Pan et al, 2020)
Differential Diagnoses
Other situations to be distinguished
Serum Antibody Detection
Laboratory Findings
Risk Factors for Severe Disease
ARDS
Treatment of Pneumonia and ARDS
Hypoxia Management in Severe and Critical COVID-19 Patient
Non-intubated Patient
Prone Position
High-flow Nasal Oxygen Treatment (HFNO)
Target Levels for Oxygenation
Nebulized Treatment
Intubated Patient
Specific Drug Treatments
CONCLUSION
REFERENCES
Pregnancy, COVID-19, and Children: Dangerous Trio?
Abstract
WHAT ARE THE CHARACTERISTICS OF PREGNANT WOMEN WITH COVID-19?
Should there be a Different Warning for Pregnant Healthcare Workers?
Could the Pregnant Women with Covid-19 Transmit the Disease to the Baby?
How is Protection from Covid-19 during Pregnancy?
What are the General Treatment Methods in Pregnant Women?
Are the Drugs used in the Treatment of Covid-19 Harmful during Pregnancy?
Can the Woman with COVID-19 Breastfeed her Baby?
Is there Anything to Pay Attention to After Birth?
Can Children Take COVID-19 Medications Used by Adults?
COVID-19 IN CHILDREN: IT IS NOT A FAIRY TALE, IT IS A REALITY
Are the Children “Carriers of COVID-19”?
Are the Signs and Symptoms in Children Different from Adults?
Is COVID-19 more Risky for Children with Asthma or Allergies? What are the Risks?
Are the Laboratory Findings Different in Children?
Which Children get COVID-19?
How is the Covid-19 Virus Transmitted to Children?
Should Masks and Gloves be used for Children who are Going Out Necessarily?
Since The Mortality Rate in Children is Close to Zero, Covid-19 has Nothing to do with Children, Right?
Should Children be Locked up at Home?
Does the Baby's Breastfeeding Affect the Covid-19 Clinical Course?
How is the Diagnosis Made?
Imaging Principles for Pediatric COVID-19 Suspected Cases
Can Sequential Cxr be Requested?
Can CXR be Ordered After Recovery?
Discharge Criteria
How Can we Tell Kids About COVID-19?
CONCLUSION
REFERENCES
COVID-19 and The Elderly: Is It Different From The Young?
Abstract
What kind of symptoms should raise suspicion of COVID-19 in the elderly?
Is there any difference between other epidemics and COVID-19 in this regard?
Is COVID-19 different in the elderly?
Is there a difference in complaints and findings in elderly people with COVID-19 compared to young people?
There are special difficulties for the elderly in the treatment and follow-up process.
What can be done?
Conclusion
References
Principles of Treatment
Abstract
Antivirals
Nucleotide Analogues (NA)
1. Favipiravir
2. Ribavirin
3. Remdesivir (GS-5734)
4. Nafamostat Mesylate
5. Nitazoxanide
Neuraminidase Inhibitors (NAI) (Oseltamivir, Zanamivir, Peramivir)
Lopinavir / Ritonavir (Kaletra)
Umifenovir (Arbidol)
Chloroquine
Hydroxychloroquine (HCQ) (Plaquenil®)
Does HCQ Have any Benefit in Prophylaxis?
The Dark Side of The Moon: Doubts about HCQ Effectiveness
Principles of Antibiotic Treatment in COVID-19
Co-infections in COVID-19
Use of Antibiotics in the Treatment of COVID-19
Why are Antibiotics Used?
How Do We Decide On Antibiotic Treatment?
Angiotensin 1 Receptor Blockers (AT1RBs) (-sartans: Losartan, telmisartan, olmesartan)
Corticosteroids
Effectiveness of IV Pulse CSD in the Treatment of COVID-19
N-acetyl-cysteine ​​(NAC)
CAN WE USE PAINKILLERS AND ANTI-INFLAMMATORY AGENTS IN COVID-19?
How to Decide for Treatment of Pain in The Pandemic Period?
Paracetamol and NSAIDs
How About Aspirin?
Should Pregnant Women Take NSAIDS?
Renin-Angiotensin System (RAS) Inhibitors
Specific Pain Syndromes and COVID-19
- Headache
Safety and NSAIDs
The Differences Between the Agents
Tocilizumab as a NSAID
IS VITAMIN C EFFECTIVE IN THE TREATMENT OF COVID-19, SEPSIS AND ARDS?
Antioxidant AscA
AscA in Sepsis
AscA in ARDS
AscA in The Treatment of Acute Lung Injury (ALI)
Effect on Coagulation Disorders
High Dose Vitamin C (AscA) Treatment in COVID-19
VITAMIN D AND COVID-19: A REAL TREATMENT?
Is COVID-19 related to vitamin D?
What are The Claims Related to Infections and DV?
Immune Modulatory Effect and Vitamin D
Who are The Risk Groups?
Smoking, Men, and vitamin D: a Bad Trio?
Vitamin D in Intensive Care
What Should Be Considered When Getting DV?
CONCLUSION
References
Critical Care in COVID-19
Abstract
CPR, Emergency Cardiac Care and COVID-19: What’s new?
Will there be any changes in the CPR?
How Should Cpr / Acls Be Done In Covid-19 Period?
Out-of-Hospital Cardiac Arrest: (OHCA)
What Does ERC Say For Resuscitation?
What Should We Do If The Intubated Patient Has A Cardiac Arrest?
Prearrest Period
When IHCA Develops
Emergency Airway Interventions During the COVID-19 Period
Is There any Difference in RSI / Rapid Sequential Intubation Application?
What will we Do Before the Procedure for a Patient Who is Coughing and Who May Succumb to Respiratory Failure?
What can we Do to Ensure Mask Seal in Pre-oxygenation?
Avoid Attempting PPV without A Good Seal!
Videolaryngoscopy (VL)
Aspiration
What Can We Do Else?
Case Report
What If We Cannot Succeed With It?
HYDROXYCHLOROQUINE AND CARDIAC ADVERSE EFFECTS
HCQ and Cardiac Adverse Effects, Ventricular Arrhythmias
COVID-19 AND RESPIRATORY FAILURE (RF)
ARDS in COVID-19
Management Protocols for RF in COVID-19
Salvage Use Of Tissue Plasminogen Activator (TPA) in The Setting Of Ards Due To COVID-19
Resuscitation in the Prone Position (PP)
Who are not Suitable for PP? (contraindications)
Common Complications of PP
MANAGEMENT OF SHOCK, SEPSIS, RESPIRATORY FAILURE AND ARDS
IV Hydration
Vasopressors
Respiratory Support
Indications of Intubating The Patient With COVID-19 Infection
During Mechanical Ventilation
The LIS or Murray Score Evaluates Lung Injury Over 4 Variables
Sepsis and COVID-19
ANTICOAGULANT TREATMENT WITH HEPARIN IN COVID-19
Can we Administer Nebulized Anticoagulation?
Does It Also Have An Anti-inflammatory And Antiviral Effect?
The Role of Antiplatelet Drugs in COVID-19 Treatment
Phosphodieasterase Inhibitors (PDEI): Dipyridamole
Thienopyridines: Ticlopidine & Clopidogrel
Glycoprotein IIb / IIIa Inhibitors
COVID-19 PLASMA TREATMENT: THE CURRENT SITUATION, DREAMS, AND REALITY
Passive Antibody Treatment (Convalescent / Immune Plasma Treatment)
Do People Who Have Experienced COVID-19 Have IgG?
Mechanism of Action
Preparation of CP
Side Effects
CONCLUSION
References
Principles of Vaccination: Will it be the Definitive Solution?
Abstract
Is Vaccination the definitive solution to pandemics?
Does it take long to develop the COVID-19 vaccine?
Against which part of the SARS-CoV-2 structure are vaccines developed?
Structure of CoV
Potential vaccine initiatives that can be developed against COVID-19
Some Types of Vaccines Being Developed Against SARS-CoV-2
1. Protein Subunit (Subunit) Vaccines
2. Viral Vectored Vaccines
3. MRNA Vaccines
4. DNA Vaccines
5. Attenuated Live Vaccines
6. Other Vaccines
Published Interim Results of Phase 3 Clinical Studies of Some Vaccines Developed Against SARS-CoV-2
1. BNT162b2 mRNA COVID-19 Vaccine Phase 3 Safety and Efficacy Analysis Results
2. Results of Phase 3 Safety and Efficacy Analysis of ChAdOx1 nCoV-19 Vaccine
Will the SARS-CoV-2 Virus Vaccine be able to Effectively Protect us Against the Epidemic? If so, How Long will it Protect?
CONCLUSION
References
Demystifying COVID-19: Understanding the Disease, Its Diagnosis and Treatment Authored byOzgur KARCIOGLUDepartment of Emergency Medicine University of Health Sciences Istanbul Education and Research Hospital Fatih, Istanbul, Turkey Selman YENIOCAK Department of Emergency Medicine, University of Health Sciences, Haseki Education and Research Hospital, Fatih, Istanbul, Turkey &

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PREFACE

For nearly a year, our lives have changed like never before. After attacking Iran and Italy, the center of the pandemic that started in China moved to Europe and the Americas. This pandemic, which healthcare professionals and other organizations all over the world have tried to overcome, will be on our agenda in the coming months and maybe years.

In order to overcome the pandemic with minimal losses, the scientific community, healthcare facilities, professional organizations, chambers, and state institutions should work in coordination and unison. The healthcare system of some countries has passed the exam since the beginning of the epidemic and has tried to do its best to mitigate the catastrophe in a very efficient organization with all medical branches, nurses, and adjunctive health services.

Herein, we have written a book to provide scientific support to these efforts as a whole, to help the public, our patients, and their relatives, and to shed light on future strategies in this manner. In this book, we tried to explain many basic points from case examples to the main principles we follow in diagnosis and treatment, real scenarios in the course of the disease, issues that need attention in specific groups, i.e., those with comorbidities, the elderly, newborns, children, and pregnant women. The spread of the disease in the world and its future predictions also found a place. We also welcome your criticism.

We should all realize that COVID-19 is not the last pandemic. It is obvious that there will be new generations and our long years to spend with masks, sanitizers, and hand disinfectants. It is important in the long run to encourage selective admissions to health institutions and not let the hospitals be overwhelmed by the disastrous situation.

The education of pre-school and school children and women plays a key role in increasing family awareness. Concretizing the virus infection, which is an abstract danger, at a level that will change the lives of people will require serious pedagogical effort and organizational skills. Non-governmental organizations should try to plan in the long term in cooperation with the government and professional chambers.

Our wish is that this book will help both our patients and their relatives, as well as healthcare professionals, who sustain health with their efforts day and night.

Wishing a healthy society and a healthy global future.

CONSENT FOR PUBLICATION

Not applicable.

CONFLICT OF INTEREST

The author declares no conflict of interest, financial or otherwise.

ACKNOWLEDGEMENTS

Declared none.

Ozgur KARCIOGLU Department of Emergency Medicine University of Health Sciences Istanbul Education and Research Hospital Fatih, Istanbul Turkey [email protected]

Contagion of the Pandemics: The Situation in the World

Ozgur KARCIOGLU,Selman YENIOCAK,Mandana HOSSEINZADEH

Abstract

There are nearly 30 million confirmed cases of COVID-19 in almost all countries and regions worldwide, and more than 900,000 deaths as of September 2020. Almost all of the cases are over 30 years old, and deaths are mostly over 50 years old. The rate of fatality varies greatly by population and geography. Males are represented slightly more than females in confirmed patients in many series, but male predominance is more remarkable in deaths. While there is an increasing trend in deaths since the beginning of March, there is a plateau and a slight downslope after mid-April.

Provided with the progress of the disease in the world, it is seen that the number of cases continues to rise and break records, but deaths do not increase in the same way. Although many countries have a drive for a premature ‘normalization’, an immature decision of normalization has caused a surge of newly diagnosed cases and deaths in many countries.

Keywords: ACE2 receptors, COVID-19, Epidemic, Growth factor, Normalization, Outbreak, Pandemic, SARS-CoV-2.

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How Can a Country Defeat COVID-19? Value of R0, Rt and Re

Ozgur KARCIOGLU

Abstract

Eradication of a disease is a very difficult and multi-factorial, multi-faceted question. The prevalence of COVID-19 in the regions around the country, the intensity of the population’s relationship with other countries, age distribution, and other demographic factors affect the magnitude of the impact of the disease on a population. In addition, the virulence of the virus, the immunity level of the population, measures taken for immunization, availability of necessary drugs, the capacity of the health sector to mitigate the pandemic will affect the damage on the society as a whole. The tests applied to identify the cases, filing, and surveillance are effective factors in the response of the state's health organization to this disease.

Keywords: COVID-19, Growth factor, Outbreak, Pandemic, Re, Ro, Rt, Surveillance, Virulence.

Eradication of disease in such a large population is a very difficult multi-factorial and multi-faceted question. The prevalence of COVID-19 in the regions around the country, the intensity of the population’s relationship with other countries (with commerce, tourism, etc.), age, and other demographic factors affect the magnitude of the impact of the disease on a population. For example, the rapid increase in the number of cases in February and March in Iran and Italy is considered to affect the number of cases in Turkey at the end of March. However , this is not the only factor. Many factors such as the virulence of the virus, the immunity level of the population in general, organization of immunization efforts, and ability to minimize the damage through drugs, the capacity of the health sector to mitigate the tsunami of patients will definitely impact how much the community is damaged by the disease. The tests applied to identify the cases, filing, and surveillance are effective factors in the response of the state's health organization to this disease (Table 1).

All these concepts are collected in the term of surveillance. Surveillance is the process of timely and systematic collection and processing of data and the evaluation of the findings obtained to provide rapid feedback to the units in need. Technological advances, the magnitude of the population, and the disease itself

will directly affect the success of these efforts. For example, Taiwan, South Korea, Israel, and New Zealand achieved great jobs in this manner, with their smaller populations and technologically advanced industries.

Table 1Factors affecting the country's struggle to overcome the pandemic are listed below

1. Virulence: The degree of damage caused by a microbe to the host tissues or the severity of the disease it inflicts. Virulence may also be defined as the measurable value of the agent’s ability to cause disease. The pathogenicity of an organism – which is defined as the ability to cause disease - is determined by its virulence factors.

2. Detection of the cases: Recognition of the patients by applying tests to people as indicated, including asymptomatic ones in some situations.

3. Isolation: Isolating diagnosed and suspicious cases from disease-naive people.

4. Filing/Filiation: In medicine, it refers to the connection of things resulting from one another or contact tracing. To open a file for the case whose diagnosis has been confirmed, to examine the case in detail with all his/her contacts, to monitor their condition by phone or home visits, to ensure that they take their medications, to ensure rapid intervention in the development of complications. Filing is a prerequisite for revealing the contacts described in the next item.

5. Person with a contact: An individual who has had an epidemiological relationship with an infected person, animal, or environment leading to the possibility of acquiring and spreading that infection.

6. Contact tracing/ follow-up: Efforts to identify individuals who have somehow contacted diagnosed and suspicious cases, monitor them with certain rules, and provide testing. In this way, contacts can be recognized and become aware of their situation. Asymptomatic contacts are also tested and diagnosed. Those determined to be in contact are either quarantined or isolated themselves.

7. Preventing arrivals from abroad: Either completely stopping the arrivals to the country by sea, land, and air or allowing them to enter after certain procedures (such as quarantine or testing).

What are R0, Rt, and Re?

R0: “R0” or “R zero” represents the startout time of the infection or epidemics. These numbers are derived from the term “basic reproductive number” which describes the average number of people infected by a single infected person. Therefore, if R0 <1, an epidemic will not occur at all. The number R0 is not a universal absolute number (constant). It will vary from region to region and over time. Screening and quarantine measures directly affect R0 (Table 2).

Table 2Estimated R0 and “herd immunity threshold” (HIT) values ​​for the most common infectious diseases (Adapted from Li 2020, Riou, 2020)DiseaseWay of Spread/ ContagiousnessR0HIT (%)MeaslesAir/respiratory12–1892–95DiphtheriaSaliva6–783–86PolioFecal-oral5–780–86EbolaBodily fluids1.5–2.533–60Whooping coughAir/droplets12–1792–94RubellaAir/droplets6–783–86SmallpoxAir/droplets5–780–86InfluenzaAir/droplets1.5–1.833–44Parotitis (Mumps)Air/droplets4–775–86SARS (2002-2003)Air/droplets2–550–80COVID-19Air/droplets1.4–3.929–74

When it comes to change over time, effective numbers, “Re” or “Rt” come to the fore. This means the actual transmission or spreading rate of the virus per time unit. For example, while Rt was above 2 in Wuhan in December 2019 and January 2020, closure and contact tracing decreased to below 1 and around 0.3 in March 2020 and after, with the strict implementation of measures such as quarantine. It is up for debate what will happen to Rt as the restrictions have been removed.

As can be understood from here, Rt allows us to track which effective measures are taken in a country, community, or group and which direction the disease evolves.

Number of tests done in a country directly affects the number of cases diagnoses and isolated, For example, South Korea has achieved great success by performing tests to many people, including asymptomatic ones, from the outbreak of the pandemics, isolation of suspicious cases while monitoring contacts.

Incubation period